Query= MSMg01no302_k14.b1 MSMg01no302_k14.b1 CHROMAT_FILE:
MSMg01no302_k14.b1 PHD_FILE: MSMg01no302_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:21 2005
(317 letters)
>mm_chr7_82197552_82198269
Length = 718
Score = 567 bits (293), Expect = e-166
Identities = 308/313 (98%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggcaacagcgcttgtactttggacactaaagatgcaagctcccactttattc 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattccaggcaacagggcttgtactttggacactaaagatgcaagctcccactttattc 458
Query: 65 cttttcatagtc-ttcccacatttttgctcttagtgatgctgaatctcttgcttttatct 123
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttttcatagtctttcacacatttttgctcttagtgatgctgaatctcttgcttttatct 398
Query: 124 gataaattcacttgacataaaaaaaaacagatttgcttttagtgttgcctttgcttattg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gataaattcacttgacataaaaaaaaacagatttgcttttagtgttgcctttgcttattg 338
Query: 184 aaacatggaaaaataagtgtttctattttataattcctataaaagatgagcatagatctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aaacatggaaaaataagtgtttctattttataattcctataaaagatgagcatagatctt 278
Query: 244 ggagaaataggagtgacagatgcattctccataggactcctggagatattgctgtggtaa 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 277 ggagaaataggagtgacagatgcattctccataggactcctggagacattgctgtggtaa 218
Query: 304 cactttttcagtg 316
| |||||||||||
Sbjct: 217 cgctttttcagtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_k14.g1 MSMg01no302_k14.g1 CHROMAT_FILE:
MSMg01no302_k14.g1 PHD_FILE: MSMg01no302_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:21 2005
(290 letters)
>mm_chr7_82013235_82013924
Length = 690
Score = 553 bits (286), Expect = e-162
Identities = 289/290 (99%)
Strand = Plus / Plus
Query: 1 accttctcttcatcccaagttttcacttgaattcacaatgctctgattggaagaacatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttctcttcatcccaagttttcacttgaattcacaatgctctgattggaagaacatat 260
Query: 61 ttcattcctatggtaaccagcatttcccctatcccttcccctttgaaaatccaaagggac 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 ttcattcctatggtaaccagcatttcccctatcccctcccctttgaaaatccaaagggac 320
Query: 121 accttttacttcagaattagaatatgcagtagaaacaggtgactctatttttaaagcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accttttacttcagaattagaatatgcagtagaaacaggtgactctatttttaaagcatg 380
Query: 181 tttctctccacaaatagcctcttaccattaggttagaagaaatattatcctctctctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttctctccacaaatagcctcttaccattaggttagaagaaatattatcctctctctctt 440
Query: 241 cttcccttactttaaattctgttccaaattattgttaaccctccacaact 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcccttactttaaattctgttccaaattattgttaaccctccacaact 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
