Query= MSMg01no303_n06.b1 MSMg01no303_n06.b1 CHROMAT_FILE:
MSMg01no303_n06.b1 PHD_FILE: MSMg01no303_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:50 2005
(655 letters)
>mm_chr7_89516153_89517207
Length = 1055
Score = 1220 bits (631), Expect = 0.0
Identities = 646/651 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgtctcttctcaggatgctgtagagattctagggctagaacaaaaaagtcccc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgtctcttgtcaggatgctgtagagattctagggctagaacaaaaaagtcccc 264
Query: 65 ccaacttctgcatagcacccttctcaagtagttttctcctaccaacccacatccttccta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaacttctgcatagcacccttctcaagtagttttctcctaccaacccacatccttccta 324
Query: 125 taaaatagcattcccttctccactgacttccttggcagggcctgttggcctaactcaggt 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 taaaatagcattcccttctccactgacttccttggcagggtctgttggcctaactcaggt 384
Query: 185 gactagagcaggaagggggagaatagagagaagaagagtggagccataggtttaggtgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gactagagcaggaagggggagaatagagagaagaagagtggagccataggtttaggtgtc 444
Query: 245 cagatcaaggagccctgttcagagaagcccatgttcagggttttcctgaggtgttttaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagatcaaggagccctgttcagagaagcccatgttcagggttttcctgaggtgttttaag 504
Query: 305 gtagactcagttccttgtggcattttgctaatcactgctgtttccaattaactgtttatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtagactcagttccttgtggcattttgctaatcactgctgtttccaattaactgtttatt 564
Query: 365 aaggttgtggagggcagacgtcaggaaaagagggctggtgtcatgtatccacagagaggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaggttgtggagggcagacgtcaggaaaagagggctggtgtcatgtatccacagagaggc 624
Query: 425 ttacactctgctttcctgttggagtagcaggcaggttttaaaaggatcctcatgccattc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttacactctgctttcctgttggagtagcaggcaggttttaaaaggatcctcatgccattc 684
Query: 485 caggcctctgctcaggcagagcctcctgtagctgagggagtttgaagacactgactgccc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caggcctctgctcaggcagagcctcctgtagctgagggagtttgaagacactgactgccc 744
Query: 545 gaggggctctgtgctggggcagctgcagcttgggttaacttctaagaaagatgtgcatta 604
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaggagctctgtgctggggcagctgcagcttgggttaacttctaagaaagatgtgcatta 804
Query: 605 tcagagaagtgtgtgtgaagccttggtgctgagcactgaaggcgcgaagaa 655
| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 805 ttagagaagtgtgtgtgaagccttggtgctgagcactgaaggcgagaagaa 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_n06.g1 MSMg01no303_n06.g1 CHROMAT_FILE:
MSMg01no303_n06.g1 PHD_FILE: MSMg01no303_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:50 2005
(647 letters)
>mm_chr7_89703464_89704508
Length = 1045
Score = 1160 bits (600), Expect = 0.0
Identities = 636/648 (98%), Gaps = 4/648 (0%)
Strand = Plus / Minus
Query: 1 ttaactagttaccacagagatactcaagaatgagaaattttaaaatgctccaaacatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ttaactagttaccacagagatactcaagaatgagaaattttaaaatgctccaaacatacc 786
Query: 61 gtaaaaacatgcccctctagggtgttttgcaatgcaaaaaagaaaaataatgaatttcac 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gtaaaaccatgcccctctagggtgttttgcaatgcaaaaaagaaaaataatgaatttcac 726
Query: 121 gaggcgaaataaggtcataaagttttaatcattgagggacaagcctgctcaccactcaat 180
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaggcgaaataagataataaagttttaatcattgagggacaagcctgctcaccactcaat 666
Query: 181 gcagcagcatctgaagtggacatacagtaatgacacacaggacatgtgtgaatcatcgca 240
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 665 gcagcagcagctgaagtggacatacagtaatgacacacaggacatgtgtgaatcattgca 606
Query: 241 gtgaacctaagatctcccatgtgtcagagaagcacacaaccattgagctctgagtaacag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gtgaacctaagatctcccatgtgtcagagaagcacacaaccattgagctctgagtaacaa 546
Query: 301 tatttctgctttgttttttttctgacttttattatactcattcatcatataggtgtttat 360
|||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tatttctgtttt-tttttttt-tgacttttattatactcattcatcatataggtgtttat 488
Query: 361 aacgagaggaaaaggagttcactcaaaaaaa-tagttaaaagtaatttttttttcatttc 419
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 487 aacgagaggaaaaggagttcactcaaaaaaaatagttaaaagtaatttttttt-catttc 429
Query: 420 taattttctatagtaaacattttcctttttggggaggttggaatgaaaaataaaacaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 taattttctatagtaaacattttcctttttggggaggttggaatgaaaaataaaacaatg 369
Query: 480 gtatctgtgacatgatacaaaggacaaaaagttttattatgaaaagaagtttgttagtga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gtatctgtgacatgatacaaaggacaaaaagttttattatgaaaagaagtttgttagtga 309
Query: 540 agaactaataattcaagcatagaagtagaataagaagcaggttggaatgcccgtgtgtta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agaactaataattcaagcatagaagtagaataagaagcaggttggaatgcccgtgtgtta 249
Query: 600 aaggtttggtccccggcttggcactatgaacaggtcatgaacctttaa 647
|||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 248 aaggtttggtccccagcttggcactatgaacaggtcatgaacctttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1045
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1035
Effective search space: 659295
Effective search space used: 659295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
