Query= MSMg01no304_c18.b1 MSMg01no304_c18.b1 CHROMAT_FILE:
MSMg01no304_c18.b1 PHD_FILE: MSMg01no304_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:27 2005
(681 letters)
>mm_chr7_81185273_81186347
Length = 1075
Score = 1151 bits (595), Expect = 0.0
Identities = 657/681 (96%), Gaps = 6/681 (0%)
Strand = Plus / Minus
Query: 1 ccttgctgtaggtaagctctcttcattctccattttagcattcttctgccactgtacaca 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 875 ccttgctgtaggtaagctctcttcgttctccattttagcattcttctgccactgtacaca 816
Query: 61 tgggagtggaaaatgattcttcaatcacccttactgcagcaaaaagtctggtggcctcat 120
||||||||||| |||||||||||||| |||| |||||||||||||||||||| |
Sbjct: 815 tgggagtggaatatgattcttcaatc------actgtagcaaaaagtctggtggcctggt 762
Query: 121 tcagacttctttttcctccatcaggagtcatcacttccttctcctggaaagcccttaaat 180
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 761 tcagacttctttttcctccaccaggagtcatcgcttccttctcctggaaagcccttaaat 702
Query: 181 gtatcaactaaattccctcccactgaccttggcattcctctttcttctgaaacattctaa 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtatcagctaaattccctcccactgaccttggcattcctctttcttctgaaacattctaa 642
Query: 241 gggaatgactgacttggtcttgggaggcacagcaaaacagcctgttcatccttccaggca 300
|||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||
Sbjct: 641 gggaatgactgacttggtcttgggaggcacagcaaaactggctggccatccttccaggca 582
Query: 301 caatgttcacctgctagctcttgttcctttgctctttgaccctctgctttctgaatgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caatgttcacctgctagctcttgttcctttgctctttgaccctctgctttctgaatgctg 522
Query: 361 aacttgtgtgaatgtattgaatttctaccttctctgtctgtatcaagatcagggacctag 420
|||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||
Sbjct: 521 aacttgtgtgaatgtattgaatttctgccttctttgtctgtatcaagttcagggacctag 462
Query: 421 tcttgttccccatttaggacaaagtgtaccctcacagaaggcaccctgtattttctaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcttgttccccatttaggacaaagtgtaccctcacagaaggcaccctgtattttctaatg 402
Query: 481 tactagttttggggccaatgaaactggcatatgatactcgttggtccaagatcagcaccg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 tactagttttggggccaatgaaactggcatatgatactcgttggtccaagatcagcgccg 342
Query: 541 agaagcatcactttcaatatcagactctcttgaagcattttaggaggccaactggtcctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agaagcatcactttcaatatcagactctcttgaagcattttaggaggccaactggtcctt 282
Query: 601 gagtcctcagagcttgtacttttgctctcatgattcctgtttaacagcttcccagatgcc 660
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagtcctcagagcttgtacctttgctctcatgattcctgtttaacagcttcccagatgcc 222
Query: 661 cagagattctgaagctacggc 681
|||||||||||| ||||||||
Sbjct: 221 cagagattctgaggctacggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1075
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1065
Effective search space: 714615
Effective search space used: 714615
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no304_c18.g1 MSMg01no304_c18.g1 CHROMAT_FILE:
MSMg01no304_c18.g1 PHD_FILE: MSMg01no304_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:27 2005
(611 letters)
>mm_chr7_81014927_81015936
Length = 1010
Score = 1131 bits (585), Expect = 0.0
Identities = 605/613 (98%), Gaps = 4/613 (0%)
Strand = Plus / Plus
Query: 2 tcttatgaagcctctaaagtaattttcttctcttaagttatcttgttcatctgttttctt 61
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 202 tctt-tgaagcctctaaagtaattttcttctcttaagttattttgttcatctgttttctt 260
Query: 62 acggtaattaaaaaaacactcctaatagatctactactgctatctattgggggtttgttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acggtaattaaaaaaacactcctaatagatctactactgctatctattgggggtttgttt 320
Query: 122 tatgaaatgaatcagcaatgtttggcagggacatatctataatgattatgatttcttgat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgaaatgaatcagcaatgtttggcagggacatatctataatgattatgatttcttgat 380
Query: 182 gtattgttcttcttacacacgtagtgatccttttggatctaattttggtttgcagtctgt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtattgttcttcttacacacgtagtgatccttttggatctaattttggtttgcagtctgt 440
Query: 242 ttgtaggatatgaatatagctattctcacttttggattcgatttctctgtccttgcatgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtaggatatgaatatagctattctcacttttggattcgatttctctgtccttgcatgt 500
Query: 302 tcagtttgcattcatctttgctggcaagcagtgtttcttaaagaaagtggacagctggat 361
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tcagtttgcattcatctttgctggcaagcagtgtttcttacagaaagtggacagctggat 560
Query: 362 cttatttttagatcagcgggactgtctttttactaaagaattaagagcatggatattcaa 421
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttatttttagatcagtgggactgtctttttactaaagaattaagagcatggatattcaa 620
Query: 422 ggtcataatcaaaaggtagggctaggctcctagccaatgagttcctaatactctgcggtt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtcataatcaaaaggtagggctaggctcctagccaatgagttcctaatactctgcggtt 680
Query: 482 gtcctaatgcttgagtctgtcctgacgtcatcttttctcatcaattcttccttgtacttt 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 gtcctaatgcttgagtctgtcctgacgtcatcttttctcatcaattcttccttgtactgt 740
Query: 542 catggatggatttatttccctcttctccacataagaaaaattccttaaagtgtctccttc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catggatggatttatttccctcttctccacataagaaaaattccttaaagtgtctccttc 800
Query: 602 a---ctgcttgtc 611
| |||||||||
Sbjct: 801 agtactgcttgtc 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1010
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1000
Effective search space: 601000
Effective search space used: 601000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
