Query= MSMg01no305_g13.b1 MSMg01no305_g13.b1 CHROMAT_FILE:
MSMg01no305_g13.b1 PHD_FILE: MSMg01no305_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:18 2005
(366 letters)
>mm_chr7_109015359_109016124
Length = 766
Score = 656 bits (339), Expect = 0.0
Identities = 348/351 (99%), Gaps = 2/351 (0%)
Strand = Plus / Minus
Query: 18 gaattc-ctaccaactgaggtatatctccagtcccagataccaaggtcttttgggtttgt 76
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gaattcactaccaactgaggtatatctccagtcccagataccaaggtcttttgggtttgt 655
Query: 77 tt-tttcctttattttattctgaaatagtcagattatctctgtaaccttggctgtccggg 135
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ttctttcctttattttattctaaaatagtcagattatctctgtaaccttggctgtccggg 595
Query: 136 tactagctctgtaagccaatcagatctctctgcctttgctgggactaatggcgtgctctg 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tactagctctgtaagccaatcagatctctctgcctttgctgggactaatggcgtgctctg 535
Query: 196 ccgtaccagctggacattaattttaagggaaatatgctaatatggagattagataggcct 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ccgtaccagctggacattaattttaagggaaatatgctaatatggagattagataggcct 475
Query: 256 gtgagctgggaactccaaactgaatacatgaccacttcaaggtacggtcaaggggacggt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gtgagctgggaactccaaactgaatacatgaccacttcaaggtacggtcaaggggacggt 415
Query: 316 ttttattgtaggtataagggaaagcacagccagagagaaagtagtagatta 366
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttttattgtaggtataagggaaagcacagccagagagaaagtagtagatta 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_g13.g1 MSMg01no305_g13.g1 CHROMAT_FILE:
MSMg01no305_g13.g1 PHD_FILE: MSMg01no305_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:18 2005
(393 letters)
>mm_chr7_108853168_108853960
Length = 793
Score = 725 bits (375), Expect = 0.0
Identities = 381/383 (99%)
Strand = Plus / Plus
Query: 1 atgaaacagggaacaattgactattaaaccttgtttcttagaaattctacttggctaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaaacagggaacaattgactattaaaccttgtttcttagaaattctacttggctaggg 260
Query: 61 atcagagaagtgaaagaactttttggctccatgttctgctccaaaaaagaaagaagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcagagaagtgaaagaactttttggctccatgttctgctccaaaaaagaaagaagaaaa 320
Query: 121 aatacttctgaggcagagaagcacagagttactgcatgccttatgcttggctactggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatacttctgaggcagagaagcacagagttactgcatgccttatgcttggctactggaaa 380
Query: 181 taaaactcagtcaaaactctgaaaggcagcttaataataccaaagtcctttgaaatgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaactcagtcaaaactctgaaaggcagcttaataataccaaagtcctttgaaatgctt 440
Query: 241 atcctagccatgtttggtgccaaaggcttgcaaaactcaggaagctgaagcaggaggatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcctagccatgtttggtgccaaaggcttgcaaaactcaggaagctgaagcaggaggatt 500
Query: 301 gtcacaaatttaagaatagccaagacaagtttttgtcacagtggggaaaagaaagagctt 360
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 gtcacaaatttaagaatagccaagacaagtccttgtcacagtggggaaaagaaagagctt 560
Query: 361 gtcaggctttctcctataacttt 383
|||||||||||||||||||||||
Sbjct: 561 gtcaggctttctcctataacttt 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
