Query= MSMg01no305_o18.b1 MSMg01no305_o18.b1 CHROMAT_FILE:
MSMg01no305_o18.b1 PHD_FILE: MSMg01no305_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:27 2005
(423 letters)
>mm_chr7_15160779_15161601
Length = 823
Score = 607 bits (314), Expect = e-178
Identities = 317/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 17 gaattcattgttatctcatattcttagctcatataaaaccccaccattgttttccttccc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gaattcattgttatctcatattcttagctcatataaaaccccaccattgttttccttccc 258
Query: 77 acacagtccctcactcctctttttttacattaatttatttatttttattattttctttat 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acacagtccctcactcctctttttttacattaatttatttatttttattattttctttat 198
Query: 137 atacatttcaaatgctatcctgaaagttccctataccctccccctctgccctgctcccct 196
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 197 atacatttcaaatgctatcctgaaagttccctata-cctccccctctgccctgctcccct 139
Query: 197 actcacccactccctcttcttggccctggcatttcatgtactggagcataaaaagtttgc 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 actcacccactccctcttcttggccctggcatttcatgtactggagcataaaaagtttgc 79
Query: 257 aaataccaaggggcctctcttcccagtgatggccgactaggccatcttctgctacatatg 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 aaataccaaggggcctctcttcccagtgatggccgactaggccatcttctgctacatatg 19
Query: 317 cagctagagacacaagct 334
||||||||||||||||||
Sbjct: 18 cagctagagacacaagct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_o18.g1 MSMg01no305_o18.g1 CHROMAT_FILE:
MSMg01no305_o18.g1 PHD_FILE: MSMg01no305_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:27 2005
(392 letters)
>mm_chr7_14998797_14999588
Length = 792
Score = 719 bits (372), Expect = 0.0
Identities = 378/380 (99%)
Strand = Plus / Plus
Query: 1 atgtttttctatatttgagagacatgactgagatatcatcctttctttcatgatctgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtttttctatatttgagagacatgactgagatatcatcctttctttcatgatctgaaa 260
Query: 61 agaaatgttcttcaaaactaactccagttcccctgattccaaattctctcccaggaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaatgttcttcaaaactaactccagttcccctgattccaaattctctcccaggaattc 320
Query: 121 acagatcttcttgatggtatttcttgtatcctgaaggaaaacaaaaataccagtgggatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagatcttcttgatggtatttcttgtatcctgaaggaaaacaaaaataccagtgggatt 380
Query: 181 tgaacctgaacaacaaaataacaggaattgagaagggtgaaagagaaggagaagaataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaacctgaacaacaaaataacaggaattgagaagggtgaaagagaaggagaagaataga 440
Query: 241 gaatgaaagtaataaatagagggaatgaggtttgggaatgctgaaaaggctcaagggaga 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatgaaagtaataaataaagggaatgaggtttgggaatgctgaaaaggctcaagggaga 500
Query: 301 ggaagcaaaagtgagaagtaacatcaccatttgtcctctgacctccacatatccacaatg 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 ggaagcaaaagtgagaagtaacatcaccatttgtcctctgacctccacatgtccacaatg 560
Query: 361 acaacaaatatagaagagca 380
||||||||||||||||||||
Sbjct: 561 acaacaaatatagaagagca 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
