Query= MSMg01no305_p23.b1 MSMg01no305_p23.b1 CHROMAT_FILE:
MSMg01no305_p23.b1 PHD_FILE: MSMg01no305_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:37 2005
(426 letters)
>mm_chr7_4862760_4863585
Length = 826
Score = 748 bits (387), Expect = 0.0
Identities = 401/407 (98%), Gaps = 3/407 (0%)
Strand = Plus / Minus
Query: 17 ggaattccagccttcccccacctaccaagatttgtaaaaaatagactttatctggacgtg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ggaattccagccttcccccacctaccaagatttgtaaaaaatagactttatctggacgtg 347
Query: 77 gagacaagcctccctaaggaaccacccataggacctaggtgtaagtgttaacagctctga 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gagacaagcctccctaaggaaccacccataggacctaggtgtaagtgttaacagctctga 287
Query: 137 ggggaaaggtttccttgacccaagtgttgcagttccgctatcctgtaagttaggcgccaa 196
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 286 ggggaaaggtttccttgacccaagtgttgcagttccgctattctgtaagttaggcgccaa 227
Query: 197 gaaataccacaaagttgcactacacatcaaatcttactcacataagagatttactgggaa 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gaaataccacaaagttgcactacacatcaaatcttactcacataagagatttactgggaa 167
Query: 257 agacacaagagggtggctgcctctgctcaggtgaaaagcagcaaagaactggacaggaag 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 agacacaagagggtggctgcctctgctcaggtgaaaagcagcaaagaactggacaggaag 107
Query: 317 cgggcttcatatagaatttcctgggtgggacggtcagaactttctaaggtggtctggtct 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 106 cgggcttcatatagaatttcctgggtgggacggtcagaactttctaaggtggtctgggct 47
Query: 377 tgttgggattctctggtctcttcttgggcttcccccccccccctttc 423
|||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 46 tgttgggattctctggtctcttcttgggct---ccccctcccctttc 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_p23.g1 MSMg01no305_p23.g1 CHROMAT_FILE:
MSMg01no305_p23.g1 PHD_FILE: MSMg01no305_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:37 2005
(299 letters)
>mm_chr7_4771997_4772695
Length = 699
Score = 571 bits (295), Expect = e-167
Identities = 298/299 (99%)
Strand = Plus / Plus
Query: 1 tacacagagaaaccctttcttctcccctaccccaccccacccaccaaaaaaatttaaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tacacagagaaaccctttcttctcccctaccccaccccacccaccaaaaaaattaaaaaa 260
Query: 61 tgaaagatttattttattttgaattgtttgtgtgcgtgaacatgtacaaggacgggtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaagatttattttattttgaattgtttgtgtgcgtgaacatgtacaaggacgggtgct 320
Query: 121 ctggtaaggcaaaagagggtgttagatcctggagaaaagatttttgtgagctgctggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggtaaggcaaaagagggtgttagatcctggagaaaagatttttgtgagctgctggagc 380
Query: 181 caagccatggggaggggttgagggtgtcctgtgaagagcaataatcccccttacctccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagccatggggaggggttgagggtgtcctgtgaagagcaataatcccccttacctccag 440
Query: 241 ccccactccatccatccacccttttcttttggctagaattccatgtgtagctaagaatg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccccactccatccatccacccttttcttttggctagaattccatgtgtagctaagaatg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
