Query= MSMg01no306_p13.b1 MSMg01no306_p13.b1 CHROMAT_FILE:
MSMg01no306_p13.b1 PHD_FILE: MSMg01no306_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:54 2005
(239 letters)
>mm_chr7_81194870_81195508
Length = 639
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 caagtcactttcccaacatttcccagattctgcgttccccgcactcaaatcatttcaaat 60
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 439 caagtcactttcccaacatttcccagactctgcgttctccgcactcaaatcatttcaaat 380
Query: 61 attgtactagacattgaactttgcatccagacccagcatcctgatgaagaaccagccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 attgtactagacattgaactttgcatccagacccagcatcctgatgaagaaccagccaca 320
Query: 121 gattataaccagatgagccagggaagggaaggtcctgactgctaaaattacctggaccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gattataaccagatgagccagggaagggaaggtcctgactgctaaaattacctggaccct 260
Query: 181 tttctgtaccatgtctcaccctaaagtgcaggctgtcttcctcttcccataaaagttat 239
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tttctgtagcatgtctcaccctaaagtgcaggctgtcttcctcttcccataaaagttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no306_p13.g1 MSMg01no306_p13.g1 CHROMAT_FILE:
MSMg01no306_p13.g1 PHD_FILE: MSMg01no306_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:54 2005
(655 letters)
>mm_chr7_81139172_81140226
Length = 1055
Score = 1181 bits (611), Expect = 0.0
Identities = 644/659 (97%), Gaps = 8/659 (1%)
Strand = Plus / Plus
Query: 1 tagatggtgtctgggaacaaaggctcaaggtgttgttgaacatttcacatcaaggggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagatggtgtctgggaacaaaggctcaaggtgttgttgaacatttcacatcaaggggctg 260
Query: 61 cctcggagtttcagtctcttctcaaatctcctgtcagcaattactgtaggagatttcaga 120
||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcggagtttcattttcttctcgaatctcctgtcagcaattactgtaggagatttcaga 320
Query: 121 aaagagggttggggtgaaaccaagaaggtggagagtctgccagtctttggggtttggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagagggttggggtgaaaccaagaaggtggagagtctgccagtctttggggtttggtat 380
Query: 181 catccagagacaaagagaactcttgtcccaccaacttctctacttgaccacagcacattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catccagagacaaagagaactcttgtcccaccaacttctctacttgaccacagcacattg 440
Query: 241 caattggttttgt----tttttggccctgttgtcttggacagattgtgtgctcttctgag 296
||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caattgg----gcagggtttttggccctgttgtcttggacagattgtgtgctcttctgag 496
Query: 297 atgtctgggcactagaggaatcacacaagcacactgggactcaatagtttttttctcccg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atgtctgggcactagaggaatcacacaagcacactgggactcaatagtttttttctcccg 556
Query: 357 aagacaggaagagaggacagaagttcctactacttggctgagggatgggaaagatgggac 416
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 557 aagacaggaagagaggacagaagttcctaccacttggctgagggatgggaaaggtgggac 616
Query: 417 tctgacagccttctcaacaaagatgcttttgatatgatggtgtgtaaataatagttctca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 617 tctgacagccttctcaacaaagatgcttttgatatgatggtgtgtaaataatagttcgca 676
Query: 477 aaagaaaaaacaaaaaaccaaaaaaccaaaaaaccccacaaatcctcaagtcaaccaacc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaagaaaaaacaaaaaaccaaaaaaccaaaaaaccccacaaatcctcaagtcaaccaacc 736
Query: 537 accaaccacccccaaaccttacaagcttggtgtgattcctagtgccagctttaatagaga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 accaaccacccccaaaccttacaagcttggtgtgattcctagtgccagctttaatagaga 796
Query: 597 ctgcaaagccaccatttttccattccagatatcagcttggcaggcactggtcttaaacc 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ctgcaaagccaccatttttccattccagatatcagcttggcaggcactggtcttaaacc 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
