Query= MSMg01no308_h21.b1 MSMg01no308_h21.b1 CHROMAT_FILE:
MSMg01no308_h21.b1 PHD_FILE: MSMg01no308_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:49 2005
(318 letters)
>mm_chr7_34973786_34974499
Length = 714
Score = 572 bits (296), Expect = e-168
Identities = 308/314 (98%), Gaps = 4/314 (1%)
Strand = Plus / Plus
Query: 5 gaattctcctctagcctccacatgcagtgtgggcgcatgcagcagacacacaggaaacca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctctagcctccacatgcagtgtgggcgcatgcagcagacacacaggaaacca 264
Query: 65 tcataactgctgctgactgtaccggggtcagtgtgaatcagggagcttctttacagtcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcataactgctgctgactgtaccggggtcagtgtgaatcagggagcttctttacagtcag 324
Query: 125 ttccaaggcaggaaagttccagcacccacacgcagcagctcacaaccactagtctcctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttccaaggcaggaaagttccagcacccacacgcagcagctcacaaccactagtctcctct 384
Query: 185 ggattccacaggcacccgcagtcatgtgcacaaacacacaccacaaatacaaacagtgga 244
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 385 ggattccacgggcacccgcagtcatgtgcacaaacacacaccacaaataca----gtgga 440
Query: 245 agcaaattttaaaaggatgaacgcctcactgtttctgaggctggccaggtgatcctctcg 304
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 agcaaattttaaaaggatgaacgcctcactgtttctgaggctgtccaggtgatcctctcg 500
Query: 305 ccttaccttgagga 318
||||||||||||||
Sbjct: 501 ccttaccttgagga 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 714
Length adjustment: 9
Effective length of query: 309
Effective length of database: 705
Effective search space: 217845
Effective search space used: 217845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_h21.g1 MSMg01no308_h21.g1 CHROMAT_FILE:
MSMg01no308_h21.g1 PHD_FILE: MSMg01no308_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:49 2005
(291 letters)
>mm_chr7_35142591_35143281
Length = 691
Score = 557 bits (288), Expect = e-163
Identities = 288/288 (100%)
Strand = Plus / Minus
Query: 1 agttttatgctaaggatttaaattggcagaataaaattctatacttacttttataaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agttttatgctaaggatttaaattggcagaataaaattctatacttacttttataaggtc 429
Query: 61 taaatggttttgaaatcccaggttagggtagtttattatcttttggttacattttaggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 taaatggttttgaaatcccaggttagggtagtttattatcttttggttacattttaggtc 369
Query: 121 gatcaagccctcagttagaccctttgagaaaaagtccaaccatggaacaagcagtacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gatcaagccctcagttagaccctttgagaaaaagtccaaccatggaacaagcagtacaga 309
Query: 181 ccgcctcggcccacttacctgctccagcacctgttgggagaaggagccctgtaccagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ccgcctcggcccacttacctgctccagcacctgttgggagaaggagccctgtaccagcca 249
Query: 241 ggcctttgccacctaccagccagaaagcaatagacaaccaagagcaca 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggcctttgccacctaccagccagaaagcaatagacaaccaagagcaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
