Query= MSMg01no308_k02.b1 MSMg01no308_k02.b1 CHROMAT_FILE:
MSMg01no308_k02.b1 PHD_FILE: MSMg01no308_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:00 2005
(506 letters)
>mm_chr7_94583360_94584265
Length = 906
Score = 909 bits (470), Expect = 0.0
Identities = 497/506 (98%)
Strand = Plus / Minus
Query: 1 aagcagctaagaaaagtctggctctgaggcagccaggacaagattcttaaagcctaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aagcagctaagaaaagtctggctctgaggcagccaggacaagattcttaaagcctaccct 804
Query: 61 cacagtgacacacttcttccaaggccataccttctccaaaaaggccacacttcctgataa 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 803 cacagtgacacacttcttccaaggccacaccttctccaaaaaggccacacttcctgataa 744
Query: 121 ttccactccctgtgctttgcatgttcagaccactacaaaatccaaaagactgtgcaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttccactccctgtgctttgcatgttcagaccactacaaaatccaaaagactgtgcaagga 684
Query: 181 aatacaaagactgaacagcaaaattttacaaagattcagatagggaagcactgatttgta 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 683 aatacaaagactgaacagcaaaattttacaaagattcagataggaaagcactgatttgta 624
Query: 241 tataattcatctttgacaatgtttgaagagttagtaggccgcagatagaaaagggcagaa 300
|| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 623 tacaattcatcttttacaatgtttgacgagttagtaggccgcagatagaaaagggcagaa 564
Query: 301 aatattttaacctgaaagaataagactaaaaagcaaaatgacctctgtgtccaccaaata 360
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 563 aatattttaacctgaaagaataagactaaaaagcaaaatgacctctgtgtttatgaaata 504
Query: 361 ttgaattcttctattggttattatcaacaaagaaagtaatactgaaaagattaagatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgaattcttctattggttattatcaacaaagaaagtaatactgaaaagattaagatgtt 444
Query: 421 ttgtaaaagttatcacaaattatatgctttttattactgcagcattgtctaggtatgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttgtaaaagttatcacaaattatatgctttttattactgcagcattgtctaggtatgatc 384
Query: 481 catggatcactttattcctcattaca 506
||||||||||||||||||||||||||
Sbjct: 383 catggatcactttattcctcattaca 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_k02.g1 MSMg01no308_k02.g1 CHROMAT_FILE:
MSMg01no308_k02.g1 PHD_FILE: MSMg01no308_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:00 2005
(286 letters)
>mm_chr7_94396647_94397331
Length = 685
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 tcctaagcaaccacacaaagtataaaaggtgttatacaattgtagatttatcatcactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctaagcaaccacacaaagtataaaaggtgttatacaattgtagatttatcatcactgg 260
Query: 61 agaggaaaacatattctaaagaggacacttattgctttttttttcataaaattgtaacta 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 agaggaaaacatattctaaagaggacacttattgctttttttt-cataaaattgtaacta 319
Query: 121 tttaaaatcacttcagttgaattcagtgcaactagcttcactttcatgattggaggacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttaaaatcacttcagttgaattcagtgcaactagcttcactttcatgattggaggacat 379
Query: 181 aggtttatcttttaatcttagttctctgtgtagtgattaggacatatcaagtctgcagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggtttatcttttaatcttagttctctgtgtagtgattaggacatatcaagtctgcagta 439
Query: 241 agttgcagttgaattaattgatatttttgaaacagattactgtatt 286
|||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 agttgcagctgaattaattgatatttttgaaacagattactgtatt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
