Query= MSMg01no313_a04.b1 MSMg01no313_a04.b1 CHROMAT_FILE:
MSMg01no313_a04.b1 PHD_FILE: MSMg01no313_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:13 2005
(741 letters)
>mm_chr7_95653644_95654784
Length = 1141
Score = 518 bits (268), Expect = e-151
Identities = 293/302 (97%), Gaps = 2/302 (0%)
Strand = Plus / Minus
Query: 440 gctcccaccttgatgataatggactgaacctctgaacctgtaaactagccccaagtaaat 499
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1141 gctcccaccttgatgataatggactgaacctctgaacctgtaagctagccccaagtaaat 1082
Query: 500 gttgtttttttttgtaagacttacctggtcatggtgtctgttcacagcagtaaaacccta 559
|||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1081 gttg--tttttttataagacttacctgctcatggtgtctgttcacagcagtaaaacccta 1024
Query: 560 agacacatcccaatacatgtttttctttataaaagtcatgttcatgcaatctcttcacag 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 agacacatcccaatacatgtttttctttataaaagtcatgttcatgcaatctcttcacag 964
Query: 620 caatagaacttagactaagacacaaggagcgtaatttttgcttacatttttgatagtgac 679
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 963 caatagaacttagactaagacacaaggagcataatttttacttacatttttgatagtgac 904
Query: 680 tcactgtatagtcagagtagagtaatatctgactcagtgccttcctgccttagcctttct 739
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 903 tcactgtatagtcagagtagagtaatatccgactcagtgccttcctgctttagcctttct 844
Query: 740 ga 741
||
Sbjct: 843 ga 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 741
Length of database: 1141
Length adjustment: 10
Effective length of query: 731
Effective length of database: 1131
Effective search space: 826761
Effective search space used: 826761
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no313_a04.g1 MSMg01no313_a04.g1 CHROMAT_FILE:
MSMg01no313_a04.g1 PHD_FILE: MSMg01no313_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:13 2005
(282 letters)
>mm_chr7_95494207_95494888
Length = 682
Score = 484 bits (250), Expect = e-141
Identities = 256/258 (99%)
Strand = Plus / Plus
Query: 1 aagaagtctcaaccctagtttctagcaccacaaactttcggtgcatcatatgctcaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaagtctcaaccctagtttctagcaccacaaactttcggtgcatcatatgctcaagga 260
Query: 61 gaacatggataaccagcaaagatgcacagtgttcctttccttgcttgagttttgatgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacatggataaccagcaaagatgcacagtgttcctttccttgcttgagttttgatgcct 320
Query: 121 ggaaagtaccacttcataacttttcccaccattcccctgtcctgccagaattcttgcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaagtaccacttcataacttttcccaccattcccctgtcctgccagaattcttgcatc 380
Query: 181 atgcaggaaatcagaaaggaaactataccttatgtcttccaagtagcttgatgttggatt 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 atgcaggaaatcagaaaggaaactataccaaatgtcttccaagtagcttgatgttggatt 440
Query: 241 tctcaccaatatgggtgg 258
||||||||||||||||||
Sbjct: 441 tctcaccaatatgggtgg 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
