Query= MSMg01no315_l06.b1 MSMg01no315_l06.b1 CHROMAT_FILE:
MSMg01no315_l06.b1 PHD_FILE: MSMg01no315_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:16 2005
(379 letters)
>mm_chr7_91176173_91176951
Length = 779
Score = 588 bits (304), Expect = e-172
Identities = 364/392 (92%), Gaps = 23/392 (5%)
Strand = Plus / Plus
Query: 5 gaattcagaggcctgtcaatagggctacctgcaggacctatgcacttggtctggagaaga 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaggcctggcaatagggctacctgcaggacctatgcacttggtctggagaaga 264
Query: 65 gagggcaaagtgagtggctgacgtggccttgaagatgtatgtcacactctgaaccctgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagggcaaagtgagtggctgacgtggccttgaagatgtatgtcacactctgaaccctgtg 324
Query: 125 tgtgagtttatgcaggtgtgtgtgggctggggtggggaatgcatctaactccacagcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgagtttatgcaggtgtgtgtgggctggggtggggaatgcatctaactccacagcaga 384
Query: 185 atacctatgggcctggtgctacagaaggattaggaaaacaaagaagaaaggaag----ga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 atacctatgggcctggtgctacagaaggattaggaaaacaaagaagaaaggaagaaagga 444
Query: 241 aggaaggaaggaaggaag-acag--ag--ag--ag--ag--ag--aga--gagatagaga 285
|||||||||||||||||| | || || || || || || ||| |||| |||||
Sbjct: 445 aggaaggaaggaaggaagga-aggaaggaaggaaggaaggaaggaagacagagagagaga 503
Query: 286 cagagagagagagagagagagagagagagagagagagagagagagaaagaaa---atata 342
||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct: 504 gagagagagagagagagagagagagagagagagagagagagagagaaagaaagaaagaaa 563
Query: 343 atatgttctgatggtcttttcctggtttttcc 374
||||||||||||||||||||||||||||||||
Sbjct: 564 atatgttctgatggtcttttcctggtttttcc 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_l06.g1 MSMg01no315_l06.g1 CHROMAT_FILE:
MSMg01no315_l06.g1 PHD_FILE: MSMg01no315_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:16 2005
(199 letters)
>mm_chr7_91320238_91320834
Length = 597
Score = 354 bits (183), Expect = e-102
Identities = 193/197 (97%), Gaps = 2/197 (1%)
Strand = Plus / Minus
Query: 1 tttggtcattatccttctattcttacagtcaacaaggcattttcttccaggaggcattgc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tttggtcatcatccttctattcttacagtcaacaaggcattttcttccaggaggcattgc 336
Query: 61 tagaccttatacagatgggaaacctggcttcaaagaagtgggttttcctgccctgcaatg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tagaccttattcagatgggaaacctggcttcaaagaagtgggttttcctgccctgcaatg 276
Query: 121 aggattccattccatgtctattccactctctcctgctgggttactctactgaagcaaacc 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggattccattc--tgtctattccactctctcctgctgggttactctactgaagcaaacc 218
Query: 181 tgtctatgaagcttatc 197
|||||||||||||||||
Sbjct: 217 tgtctatgaagcttatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 597
Length adjustment: 8
Effective length of query: 191
Effective length of database: 589
Effective search space: 112499
Effective search space used: 112499
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
