Query= MSMg01no316_c23.b1 MSMg01no316_c23.b1 CHROMAT_FILE:
MSMg01no316_c23.b1 PHD_FILE: MSMg01no316_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:52 2005
(279 letters)
>mm_chr7_76301760_76302438
Length = 679
Score = 503 bits (260), Expect = e-147
Identities = 275/280 (98%), Gaps = 2/280 (0%)
Strand = Plus / Plus
Query: 1 ggaattcccatacctgatc-gcaaaagctgagcttgcaagtcctctaggtgtctagattc 59
||||||||||||||||| | | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ggaattcccatacctga-cagtaaaagctgagcttgcaagtccactaggtgtctagattc 259
Query: 60 ctgaatggggagagccctgcatgcagaaaattcagctgaatagacacaccctttgctttt 119
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgaatggggagaaccctgcatgcagaaaattcagctgaatagacacaccctttgctttt 319
Query: 120 gactactatttgaatctggggtgtcatttttcagtgattcttgaactcctaactctgata 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gactactatttgaatctggggtgtcatttttcagtgattcttgaactcctaactctgata 379
Query: 180 ggttggccacatggcaagcagtctccacaccaaagagtagttgggcaatacaaaatggaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggttggccacatggcaagcagtctccacaccaaagagtagttgggcaatacaaaatggaa 439
Query: 240 tcaatgaatgaaaaacaaaacaaggaaacaaaagcaacag 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaatgaatgaaaaacaaaacaaggaaacaaaagcaacag 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no316_c23.g1 MSMg01no316_c23.g1 CHROMAT_FILE:
MSMg01no316_c23.g1 PHD_FILE: MSMg01no316_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:52 2005
(681 letters)
>mm_chr7_76447734_76448814
Length = 1081
Score = 1263 bits (653), Expect = 0.0
Identities = 674/681 (98%)
Strand = Plus / Minus
Query: 1 attctctgagctttaggaattcatgtactatattgtcgattattgcctggagaaaggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 attctctgagctttaggaattcatgtactatattgtcgattattgcctggagaaaggtct 822
Query: 61 agagagccacactttcagctttgcatgaatgtgtttattgaccatatagcaagtcagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 agagagccacactttcagctttgcatgaatgtgtttattgaccatatagcaagtcagagc 762
Query: 121 aaaatatcaacaagttgggtgctctaagaatctagtcaaaattgactgggacagccttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aaaatatcaacaagttgggtgctctaagaatctagtcaaaattgactgggacagccttgt 702
Query: 181 tgaggttgtcagctgcaatcagagtccggagatgaacagagcattatcttggatgcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 701 tgaggttgtcagctgcaatcagagtccggagatgaacagagcattatcttggatgtttcc 642
Query: 241 aagaaataggacatataagatcagaaagatgaggttttcaaatgaagaacatataaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aagaaataggacatataagatcagaaagatgaggttttcaaatgaagaacatataaacat 582
Query: 301 ccagcagaaaccaagttaggaacctgaggcaattcagctggggttctggattgacattcc 360
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 581 ccagcagaaaccaagtaaggaacctgaggcaattcagctggggttctggattgagattcc 522
Query: 361 tgtctatgaatgagcatcccatgactgaatttcctcactggaagattatataatggataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tgtctatgaatgagcatcccatgactgaatttcctcactggaagattatataatggataa 462
Query: 421 acagtagcagtgttctttctcaagagcaaaatagtcttcttctctggctgtttagctatc 480
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 461 atagtagcagtgttctttctcaagagcaaaatagtctttttctctggctgtttagctatc 402
Query: 481 aacctccctctcaataacagagttagggagcccagagcctggcaggagaccttccagtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aacctccctctcaataacagagttagggagcccagagcctggcaggagaccttccagtct 342
Query: 541 acttgcaggcgactgtctttcatctgaagaggaaggagctatgacaaccgcaccttcaga 600
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 341 acttgcaggcgactgtctttcatctgaagtggaaggagctatgacaaccgcaccttcaga 282
Query: 601 gccaccttctttgtgagctcaatcaatgcatgaacttttgaaatagccatttcatagatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gccaccttctttgtgagctcaatcaatgcatgaacttttgaaatagccatttcatagatg 222
Query: 661 gttcatacagcatatgaaata 681
|||||||||| ||||||||||
Sbjct: 221 gttcatacagtatatgaaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
