Query= MSMg01no317_a14.b1 MSMg01no317_a14.b1 CHROMAT_FILE:
MSMg01no317_a14.b1 PHD_FILE: MSMg01no317_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:57 2005
(648 letters)
>mm_chr7_137065053_137066100
Length = 1048
Score = 1129 bits (584), Expect = 0.0
Identities = 635/654 (97%), Gaps = 7/654 (1%)
Strand = Plus / Plus
Query: 1 cttctttggagagaagaatattttgctgacccagatcaaaatgggcactttatatatttc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 196 cttctttggagagaagaatattttgctgacccagatc-aaatgggcactttatatatttc 254
Query: 61 ttgtattctacttataacatcctaaatcatccagtttgttggataacttatcatcaattc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttgtattctacttataacaccctaaatcatccagtttgttggataacttatcatcaattc 314
Query: 121 ttgttttctaactatgcatac----acagacagacacacacacaca-a-acacacacaca 174
|||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||
Sbjct: 315 ttgttttctaacaatgcatacacagacagacagacacacacacacacacacacacacaca 374
Query: 175 catacactcaacagtgacctctatgaatgccaaaatcttgctgtccttactccttgtcta 234
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cacacactcaacagtgacctctatgaatgccaaaatcttgctgtccttactccttgtcta 434
Query: 235 gagcctcaaaccatacttgaggctgagcaggagcttgataaaggtctactgttgaatgaa 294
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 435 gagcctcaaaccagacttgaggctgagcaggagcttgataaaggtctattgttgaatgaa 494
Query: 295 taaatgcatgcaaagtgttgggcaaaaccccacggatccctcttcaccaaccactgaccc 354
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 495 taaacgcatgcaaagtgttgggcaaaaccccacggatccctcttcaccaactactgaccc 554
Query: 355 aataaatgaagagcagacttgaaaggtttcctacccaggcctgcgtcctgtgcctgtttc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aataaatgaagagcagacttgaaaggtttcctacccaggcctgcgtcctgtgcctgtttc 614
Query: 415 aggcagggaaggcgagccagaggctttccaagcagacagacatgagcccagctccaggtt 474
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 615 aggcagggaaggagagccagaggctttccaagcaaacagacatgagcccagctccaggtt 674
Query: 475 ctctgatgtgaccctaggctgaccagtcaaccaggttctccttctggagagaggtgggta 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 675 ctctgatgtgaccctaggctgaccagtcaaccaggttctccttctggagagaggcgggta 734
Query: 535 attctctgatgtacttgccctcattcgaggacttaatagagggagaacacaaactggcca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 attctctgatgtacttgccctcattcgaggacttaatagagggagaacacaaactggcca 794
Query: 595 gcagtgttggtttagcaaactctcacggccatataatatagcataaatgaagac 648
|||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 795 gcagtgttggtttagcaaactctcacggccatataaaaaagcataaatgaagac 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_a14.g1 MSMg01no317_a14.g1 CHROMAT_FILE:
MSMg01no317_a14.g1 PHD_FILE: MSMg01no317_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:58 2005
(449 letters)
>mm_chr7_137234578_137235430
Length = 853
Score = 253 bits (131), Expect = 1e-71
Identities = 153/165 (92%), Gaps = 11/165 (6%)
Strand = Plus / Minus
Query: 1 cagatatgattctgtctcacaaaaaacaaaacaaaacaaaacaaaacaaaacaacaaacc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 413 cagatatgattctgtctcacaa-----aaaacaaaacaaaacaaaacaaaacaacaaacc 359
Query: 61 aaccaacggaggtgctttaccagtagctcaatggctaaagtgctggctggctgt----gt 116
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 358 aaccaacggaggtgctttaccagtagctcaatggctaaagtgctggctggctgtgtgagt 299
Query: 117 atgaagacatgactcaaatccccagcctca-ttagaaaacactgg 160
||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 298 atgaagacacgactcaaatccccagcct-agttagaaaacactgg 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 853
Length adjustment: 10
Effective length of query: 439
Effective length of database: 843
Effective search space: 370077
Effective search space used: 370077
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
