Query= MSMg01no317_m11.b1 MSMg01no317_m11.b1 CHROMAT_FILE:
MSMg01no317_m11.b1 PHD_FILE: MSMg01no317_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:50 2005
(239 letters)
>mm_chr7_30065359_30065997
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Minus
Query: 1 acaggttcctgaattcgcagagcttggattccagtgggagcgaacacttaacgtgcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaggttcctgaattcgcagagcttggattccagtgggagcgaacacttaacgtgcagag 380
Query: 61 tactcgccaaagattaaatgactagcggtgactagaagacagcgggataagaacagtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tactcgccaaagattaaatgactagcggtgactagaagacagcgggataagaacagtgat 320
Query: 121 agaagatggtgaagggtacttaactcaggaagtactctaaggagggtggcacctatccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 agaagatggtgaagggtacttaactcaggaagtactctaaggagggtggcacctatccta 260
Query: 181 acaattgaatgagtatttggcagccatactaagaccttgggaccagtgtcccaggtagt 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acaattgaatgagtaggtggcagccatactaagaccttgggaccagtgtcccaggtagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_m11.g1 MSMg01no317_m11.g1 CHROMAT_FILE:
MSMg01no317_m11.g1 PHD_FILE: MSMg01no317_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:50 2005
(142 letters)
>mm_chr7_29892799_29893339
Length = 541
Score = 232 bits (120), Expect = 6e-66
Identities = 136/142 (95%), Gaps = 5/142 (3%)
Strand = Plus / Plus
Query: 1 aattccagatgatccctgaaagtcattcctatttttacattttgagacaatcgtgtgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aattccagatgatccctgaaagtcattcctatttttacattttgagacaat-gtgtgtgt 259
Query: 61 tacgtatttgttcatgcacaagtgtgcattcttgtgcctgtggagaccaaaggtcaactt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatgtatttgttcatgcacaagtgtgcattcttgtgcctgtggagaccaaaggtcaactt 319
Query: 121 cgggggggggtggt--gggggg 140
||||||||| ||| ||||||
Sbjct: 320 -ggggggggg-ggttagggggg 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 142
Length of database: 541
Length adjustment: 8
Effective length of query: 134
Effective length of database: 533
Effective search space: 71422
Effective search space used: 71422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
