Query= MSMg01no318_f20.b1 MSMg01no318_f20.b1 CHROMAT_FILE:
MSMg01no318_f20.b1 PHD_FILE: MSMg01no318_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:32 2005
(342 letters)
>mm_chr7_108877942_108878683
Length = 742
Score = 603 bits (312), Expect = e-177
Identities = 338/354 (95%), Gaps = 12/354 (3%)
Strand = Plus / Plus
Query: 1 atccctctcctgggctgccctcagaagaatgttctctctgttctgctcctcctggtcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccctctcctgggctgccctcagaagaatgttctctctgttctgctcctcctggtcctc 260
Query: 61 ttaaggctttcaccaatgagcaatcaaagagctctttgtaaaataggccacaccccagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggctttcaccaatgagcaatcaaagagctctttgtaaaataggccacaccccagct 320
Query: 121 gctgctgctgctgc------------actccggagacaggcaggtggatttgagtttgag 168
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgctgctgctgctgctgctgctgcactccggagacaggcaggtggatttgagtttgag 380
Query: 169 gccaacctggttacagagcaaattctggaacagccagggctgttaaacagagaaaccttg 228
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 gccaacctggttacagagcaaattctggaacagccagggttgttaaacagagaaaccttg 440
Query: 229 tctcaaatagcaaaatatgattaaacaaaaaagtttcctacttaaaacctttgacctcag 288
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcaaatagcaaaataggaacaaacaaaaaagtttcctacttaaaacctttgacctcag 500
Query: 289 tattgaagcagcaccacaggccagattccttcccagagccctaaatggcttacc 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattgaagcagcaccacaggccagattccttcccagagccctaaatggcttacc 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_f20.g1 MSMg01no318_f20.g1 CHROMAT_FILE:
MSMg01no318_f20.g1 PHD_FILE: MSMg01no318_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:32 2005
(339 letters)
>mm_chr7_109040403_109041141
Length = 739
Score = 607 bits (314), Expect = e-178
Identities = 332/338 (98%)
Strand = Plus / Minus
Query: 1 tacagatggttgtgagccaccatgtggttactgggaattgaactcaggacctgtggaaga 60
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 639 tacagatggttgtgagccaccatgtggttgctgggaattgaactcaggacctctggaaga 580
Query: 61 gcagtcagtgctcttaaccactgagccatctctccagccccaagaccattcttctggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gcagtcagtgctcttaaccactgagccatctctccagccccaagaccattcttctggcta 520
Query: 121 tttcatttactctcctatgatcattgtccccagatgtccctcctatcttctttatctcct 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tttcacttactctcctatgatcattgtccccagatgtccctcctatcttctttatctcct 460
Query: 181 ctctatctcagacagtcttcccctttgacccttcatcacagctctggacacatggatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctctatctcagacagtcttcccctttgacccttcatcacagctctggacacatggatagt 400
Query: 241 ccccattattttagagtttctttccaaagtccccagtgaggtttaacaagtcatggtgac 300
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccccagtagtttagagtttctttccaaagtccccagtgaggtttaacaagtcatggtgac 340
Query: 301 taattagctagagacatttgttgaatgtcagctgagtg 338
||||||||| ||||||||||||||||||||||||||||
Sbjct: 339 taattagctggagacatttgttgaatgtcagctgagtg 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
