Query= MSMg01no318_n14.b1 MSMg01no318_n14.b1 CHROMAT_FILE:
MSMg01no318_n14.b1 PHD_FILE: MSMg01no318_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:06 2005
(373 letters)
>mm_chr7_124789129_124789901
Length = 773
Score = 708 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Minus
Query: 4 gaattcactgggattgcccaaggtatgtttctcccatcccttatttaaataaagtgagct 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaattcactgggaatgcccaaggtatgtttctcccatcccttatttaaataaagtgagct 514
Query: 64 ttgggaaaatagagcaacatacagttttgggtttctagttgccttggaaaagcagatgat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttgggaaaatagagcaacatacagttttgggtttctagttgccttggaaaagcagatgat 454
Query: 124 ttgatagtcaacctcaagttgacatcttaaccacattgggcaagagttgagcctggaacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgatagtcaacctcaagttgacatcttaaccacattgggcaagagttgagcctggaacc 394
Query: 184 acaagtggtctaggctggaatgcacagtgcctgcctcatgcagggctcatcctgacttgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 acaagtggtctaggctggaatgcacagtgcctgcctcatgcagggctcatcctgacttgc 334
Query: 244 aggtgcatggacctcaggcagtctctgttagtgtgaacaacgccccctgtgggactcaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aggtgcatggacctcaggcagtctctgttagtgtgaacaacgccccctgtgggactcaca 274
Query: 304 ccaactcacaagtagtagtatttgctggagcctgagttaaggttttgtagtaacattatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccaactcacaagtagtagtatttgctggagcctgagttaaggttttgtagtaacattatt 214
Query: 364 ggcatctcaa 373
||||||||||
Sbjct: 213 ggcatctcaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_n14.g1 MSMg01no318_n14.g1 CHROMAT_FILE:
MSMg01no318_n14.g1 PHD_FILE: MSMg01no318_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:06 2005
(332 letters)
>mm_chr7_124632232_124632964
Length = 733
Score = 582 bits (301), Expect = e-170
Identities = 325/333 (97%), Gaps = 1/333 (0%)
Strand = Plus / Plus
Query: 1 caaactcacgttggcgggcttgtatcattgtgcagcaagcccctttaccaactgagctag 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaactcacgttggcaggcttgtatcattgtgcagcaagcccctttaccaactgagctag 260
Query: 61 ctcactatcttctggctttcttctctgtttatagctggatctttgtatgtcaatttatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcactatcttctggctttcttctctgtttatagctggatctttgtatgtcaatttatgt 320
Query: 121 ccatgtggggaatggcacctggctcctttgagcaagctaggaaagtactcagtcactgag 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgtggggaatggcacctggcacctttgagcaagctaggaaagtactcagtcactgag 380
Query: 181 ctacatagagtccaacctatgggaagggcctattgatgttcctatctgtgagctcttgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctacatagagtccaacctatgggaagggcctattgatgttcctatctgtgagctcttgtc 440
Query: 241 c-tctattgataatgtttggcactcccaacagaaccccaggtactggctccctagtgaag 299
| | || |||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 441 catttagtgataatgtttggcactcccaacagaaccccagggactggctccctagcgaag 500
Query: 300 cagctatttacaacatgttccaaagggtgagtg 332
||||| |||||||||||||||||||||||||||
Sbjct: 501 cagctgtttacaacatgttccaaagggtgagtg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 733
Length adjustment: 9
Effective length of query: 323
Effective length of database: 724
Effective search space: 233852
Effective search space used: 233852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
