Query= MSMg01no319_k06.b1 MSMg01no319_k06.b1 CHROMAT_FILE:
MSMg01no319_k06.b1 PHD_FILE: MSMg01no319_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:01 2005
(235 letters)
>mm_chr7_141165846_141166478
Length = 633
Score = 412 bits (213), Expect = e-120
Identities = 229/235 (97%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 1 taatcgctgcttaactttctccaggtcttttccttgcctctgaaacttaacaattttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatcgctgcttaactttctccaggtcttttccttgcctctgaaacttaacaattttaaa 260
Query: 61 tgctagcattaataatggtaagaatatcaatcaggattccttctcccagaccctgagctt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tgctagcattaataatggtaagaatatcaatcaggattcctcctcccagaccctgagctt 320
Query: 121 tggtgataccctgtacccttggggggccctttagtacagtataaggggctcccattgtgc 180
||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||
Sbjct: 321 tggtgataccctgtacccttggggg--ccttcagtacagtacaaggggctcccattgtgc 378
Query: 181 caggtagtttccccagctggggagtccctgcagttccgtataactggctcaagcc 235
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 379 caggtagtttccccagctggggagtccctgcagttccgtacaactggctcaagcc 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 633
Length adjustment: 9
Effective length of query: 226
Effective length of database: 624
Effective search space: 141024
Effective search space used: 141024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no319_k06.g1 MSMg01no319_k06.g1 CHROMAT_FILE:
MSMg01no319_k06.g1 PHD_FILE: MSMg01no319_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:01 2005
(149 letters)
>mm_chr7_141190254_141190802
Length = 549
Score = 234 bits (121), Expect = 2e-66
Identities = 139/145 (95%)
Strand = Plus / Minus
Query: 1 ttaattggagctgcgtctcaaccttttttcaccagcacaattaaccttgaatctggacag 60
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttaattagagctgcgactcaaccttttttcaccagcacaattaaccttgaatctggacag 286
Query: 61 agatctgccctcccaggaggcatctgtgctgaggtttctttgaagatgttacctacaggg 120
||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 285 agatctgtcctcccaggaggcatctgtggtgaggtttctttgaggatgttacctacaggg 226
Query: 121 attttttttttcttctgagaactcc 145
||||||||||||||||||||||||
Sbjct: 225 tttttttttttcttctgagaactcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
