Query= MSMg01no320_l24.b1 MSMg01no320_l24.b1 CHROMAT_FILE:
MSMg01no320_l24.b1 PHD_FILE: MSMg01no320_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:20 2005
(219 letters)
>mm_chr7_128086853_128087471
Length = 619
Score = 393 bits (203), Expect = e-114
Identities = 215/219 (98%)
Strand = Plus / Minus
Query: 1 caagaaaatgtcactgaatttcaactatgaaatgattaagataccctcttcctacagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 caagaaaatgtcactgaatttcaactatgaaatgattaagataccctcttcctacagggg 360
Query: 61 aaatgatttgtcctgtaaaattttagttttatgattaccagctgtacttgaggggcagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaatgatttgtcctgtaaaattttagttttatgattaccagctgtacttgaggggcagaa 300
Query: 121 aaaaggaacttttgtcccatcagaggctaacataaagtgagagaagctgagattctaaac 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaaaggaacttttgtcccatcagtggctaacataaagtgagagaagctgagattctaaac 240
Query: 181 ccagtattggccaggcacatggagaggcagtgacgtcac 219
|||| | |||||||||||||||||||||||||||||||
Sbjct: 239 ccaggaagggccaggcacatggagaggcagtgacgtcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_l24.g1 MSMg01no320_l24.g1 CHROMAT_FILE:
MSMg01no320_l24.g1 PHD_FILE: MSMg01no320_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:20 2005
(227 letters)
>mm_chr7_127905603_127906228
Length = 626
Score = 389 bits (201), Expect = e-113
Identities = 219/225 (97%), Gaps = 1/225 (0%)
Strand = Plus / Plus
Query: 1 tgaaacttgtaaaatcctgccacctttctatgtgtgtaagtgacagttgacgagcctcct 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaacttgtaaa-tcctgccacctttctatgtgtgtaagtgacagttgacgagcctcct 259
Query: 61 cctgtgtgtgacagtgcttggtgatgatgctgcctgatggtgacaagactttctgttgtc 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 260 cctgtgtgtgacagtgcttggtgatgatgctgcctgatggtgacaagcctttctgttgtc 319
Query: 121 ccaacagcactattgaactctatcagcagaggatgcggtggctcacagagaacagcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccaacagcactattgaactctatcagcagaggatgcggtggctcacagagaacagcaaga 379
Query: 181 aggtaatggtctctgtgtctatttccaccttcttcagctcagctg 225
||||||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 380 aggtaatggccactgtgtctatttctgccttcttcagctcagctg 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 626
Length adjustment: 9
Effective length of query: 218
Effective length of database: 617
Effective search space: 134506
Effective search space used: 134506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
