Query= MSMg01no321_b22.b1 MSMg01no321_b22.b1 CHROMAT_FILE:
MSMg01no321_b22.b1 PHD_FILE: MSMg01no321_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:47 2005
(351 letters)
>mm_chr7_64324019_64324770
Length = 752
Score = 592 bits (306), Expect = e-173
Identities = 339/350 (96%), Gaps = 1/350 (0%)
Strand = Plus / Plus
Query: 1 taggagtaagtaatttgacaccactaactctcactcttccaaactaacaccaaaatcaat 60
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggagtaagtaattcaacaccagtaactctcactcttccaaactaacaccaaaatcaat 260
Query: 61 caaggaaatggggtgttcttttgtgcagaaaatagcactatgcagcatgaagaggcacag 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggaaatggggtgttcttttgtacagaaaatagcactatgcagcatgaagaggcacag 320
Query: 121 aaaagaccaatcacttaagatgctgaaaggaactcttgaaca-ttttgaagtttaaagat 179
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 321 aaaagaccaatcacttaagatgctgaaaggaactcttgaaaaattttgaagtttaaagat 380
Query: 180 tttaaatttataaagttattttctaatctaaaaacacctataataaatggaattatttct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaatttataaagttattttctaatctaaaaacacctataataaatggaattatttct 440
Query: 240 cattttgtcacagaggtgtttttgtgatctaaaaccgagtggcacggggatgaggccact 299
||||||||||||||||||| ||||||||||||||| |||||| | |||||||||||||||
Sbjct: 441 cattttgtcacagaggtgtctttgtgatctaaaactgagtggtatggggatgaggccact 500
Query: 300 cataaacctgggattctggatgcagagacaggaggatcaaacgtccaagt 349
| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cgtaaacctgggattctggatgcagagacaggaggatcaaacgtccaagt 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 752
Length adjustment: 9
Effective length of query: 342
Effective length of database: 743
Effective search space: 254106
Effective search space used: 254106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_b22.g1 MSMg01no321_b22.g1 CHROMAT_FILE:
MSMg01no321_b22.g1 PHD_FILE: MSMg01no321_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:47 2005
(585 letters)
>mm_chr7_64517507_64518487
Length = 981
Score = 1048 bits (542), Expect = 0.0
Identities = 574/586 (97%), Gaps = 6/586 (1%)
Strand = Plus / Minus
Query: 1 tgatgtgtgattgacagcttttctgccttatcaagttgctttgagctaggaagcagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgatgtgtgattgacagcttttctgccttatcaagttgctttgagctaggaagcagatga 722
Query: 61 attataaattctgggaacattgttgatttctttaattattagaatttcatcgaatattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 attataaattctgggaacattgttgatttctttaattattagaatttcatcgaatattca 662
Query: 121 ttaggggctgagggtgttccttaactgtagagagcattcctggaatgtagaagactttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttaggggctgagggtgttccttaactgtagagagcattcctggaatgtagaagactttga 602
Query: 181 atttgatccttagaaccttagataaaaaaaacaatattgttgtaaattaatagtcactta 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 601 atttgatccttagaaccttagataaaaaaa--aatattgttgtaaattaatagtcactta 544
Query: 241 tttactgtttctagataaaaaaataaagttcattcaatgactaagggcatatccagtgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tttactgtttctagataaaaaaataaagttcattcaatgactaagggcatatccagtgac 484
Query: 301 atttgtggcaaggaaaaagaggtagaatggcagggcaggactgagcttccccccctcaga 360
|||| ||||||||||||||||||||| |||||||||||||||||||||| || |||||||
Sbjct: 483 attt-tggcaaggaaaaagaggtagagtggcagggcaggactgagcttctcctcctcaga 425
Query: 361 gagcatacaccaccttggaactgaagcttggcattgcttcctactccctggaagggggac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gagcatacaccaccttggaactgaagcttggcattgcttcctactccctggaagggggac 365
Query: 421 ttctttcaaatggtaatggatttatttcatggatactcacatg-ttttttcatgtgagtt 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 364 ttctttcaaatggtaatggatttatttcatggatactcacatgtttttttcatgtgagtt 305
Query: 480 tgctagtgtgtgtgtgtggggggggggcggtcctacaggaactattaagggagtatatca 539
|||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||
Sbjct: 304 tgctagtgtgtgtgtgtgtggggggg--tgttctacaggaactattaagggagtatatca 247
Query: 540 ctggactgtgtgtcaattctcagcaagaattctcttagggacatga 585
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctggactgtgtgtcaattctcagcaagaattctcttagggacatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 981
Length adjustment: 10
Effective length of query: 575
Effective length of database: 971
Effective search space: 558325
Effective search space used: 558325
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
