Query= MSMg01no321_n06.b1 MSMg01no321_n06.b1 CHROMAT_FILE:
MSMg01no321_n06.b1 PHD_FILE: MSMg01no321_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:39 2005
(267 letters)
>mm_chr7_134432382_134433048
Length = 667
Score = 485 bits (251), Expect = e-142
Identities = 263/267 (98%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 2 ggaattcttcctgactc-cacactcaaatgttggaattatagtcgtgtgccaccatgcct 60
||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ggaattcttcctgactcaaacactcaaatgttggaattacagtcgtgtgccaccatgcct 260
Query: 61 agctgtcagaagtttacgaagctgaagaaggccacactcaggtgtctgaaggtaatatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctgtcagaagtttacgaagctgaagaaggccacactcaggtgtctgaaggtaatatag 320
Query: 121 cagtcccactgagggagaagagctgaattatgactacgagttccaaggagggtcaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 cagtcccactgagggagaagagctgaattatgactacgagttccagggagggtcaaagaa 380
Query: 181 aagtctgaagagaaggaatgaggatgagagatagttcaaaggacatgataactgaccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtctgaagagaaggaatgaggatgagagatagttcaaaggacatgataactgaccagg 440
Query: 241 aaggggtgtgtgtgtgtgtgtgtgtgt 267
|||||||||||||||||||||||||||
Sbjct: 441 aaggggtgtgtgtgtgtgtgtgtgtgt 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no321_n06.g1 MSMg01no321_n06.g1 CHROMAT_FILE:
MSMg01no321_n06.g1 PHD_FILE: MSMg01no321_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:39 2005
(251 letters)
>mm_chr7_134640820_134641470
Length = 651
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%)
Strand = Plus / Minus
Query: 1 attctttgacatgagggttaggagccaaaccaaatggtcctcctgtaactgcactatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 450 attctttgacatgagggttaggagccaaaccaaatggtcctcctgtaactgcagtatgtg 391
Query: 61 cccttaacttctgagctatctccattctcatatatttacttttatgtagtgctggggagg 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 390 cccttaacttctgagctatctccattcttatatatttacttttatgtagtgctggggagg 331
Query: 121 gaactcaacttgatccatggagtcaaacactgcgctgactgagcttgctctagttgtcta 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gaactcaacttgacccatggagtcaaacactgcgctgactgagcttgctctagttgtcta 271
Query: 181 tcattgtgatattctgaaccaggactgtaccaacacacctggtggggggcacacagttgc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tcattgtgatactctgaaccaggactgtaccaacacacctggtggggggcacacagttgc 211
Query: 241 acttttagtt 250
||||||||||
Sbjct: 210 acttttagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
