Query= MSMg01no322_a17.b1 MSMg01no322_a17.b1 CHROMAT_FILE:
MSMg01no322_a17.b1 PHD_FILE: MSMg01no322_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:55 2005
(571 letters)
>mm_chr7_25594382_25595351
Length = 970
Score = 996 bits (515), Expect = 0.0
Identities = 554/567 (97%), Gaps = 1/567 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggctaatcccggctacatagtgagagaccctgcctcaagaaacataacaatg 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gaattccaggctaatcgaggctacatagtgagagaccctgcctcaagaaacataacaatg 639
Query: 65 aaactaacccctaagacttttatttatggttcatagcatgtagaacccttccatgctgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aaactaacccctaagacttttatttatggttcatagcatgtagaacccttccatgctgtt 579
Query: 125 ctggagcagcggggatctgagggggtgtgctgtctctctgctgtgtgcagactctgagta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ctggagcagcggggatctgagggggtgtgctgtctctctgctgtgtgcagactctgagta 519
Query: 185 acttgaagtattgcatcctagatattgtgcaattcgatgcttgccagccatttccccaag 244
|||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 518 acttgaagtactgcatcctagatattgtgcaattcgatgcctgtcagccatttccccaag 459
Query: 245 aaaaggcttgaggattctttgtcctctgtcttcccctctttctcagccctcatggcgatc 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 458 aaaaggcttgaggattctttgtcctctgtcttcccctctttctcagccatcatggcgatc 399
Query: 305 acacactgtctacatgtcctctcttccctcaaataaccgcccttatactagatctgttgt 364
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 398 acacactgtctacatgtcctctgttccctcaaataaccgcccttatactagatctgttgt 339
Query: 365 atggggtgacccccaggggacacctaggcatgggcctgccatggaccccctccccgcatt 424
||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 338 atggggtgattctcaggggacacctaggcatgggcctgccatgg-ccccctccccgcatt 280
Query: 425 atatttcataacaggcagtaatgcatgaatgaaaaaaatgaagacaggactgctcctgag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atatttcataacaggcagtaatgcatgaatgaaaaaaatgaagacaggactgctcctgag 220
Query: 485 tatgggccaggaagtttactgtagatatgagggaaaacgcagccagaggtgtctggaagt 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tatgggtcaggaagtttactgtagatatgagggaaaacgcagccagaggtgtctggaagt 160
Query: 545 gtccatacagaaccgagctgggacagc 571
|||||||||||||||||||||| ||||
Sbjct: 159 gtccatacagaaccgagctgggccagc 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_a17.g1 MSMg01no322_a17.g1 CHROMAT_FILE:
MSMg01no322_a17.g1 PHD_FILE: MSMg01no322_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:55 2005
(631 letters)
>mm_chr7_25437247_25438277
Length = 1031
Score = 1147 bits (593), Expect = 0.0
Identities = 621/631 (98%), Gaps = 4/631 (0%)
Strand = Plus / Plus
Query: 1 caccggaaacggagttaagagtgatcgtgaggcacgtggtgatcgtgctgggaactgagc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 caccgaaaacggagttaagagtgatcgtgaggcacgtggtgatcgtgctgggaactgagc 264
Query: 61 tcatgccctcttcaagagcttttatttgtgggcttttatcccctgagctgtctctctagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcatgccctcttcaagagcttttatttgtgggcttttatcccctgagctgtctctctagc 324
Query: 121 tctcttgattttctttcccttttttttttatttaaagttttttttttttaattaaaattg 180
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 325 tctcttgattttctttccctttttttta-atttaaagtttttttttt--aattaaaattg 381
Query: 181 atttgcacatctatctctctagcccagttaggttttgtttgttttcgttttgtttttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 atttgcacatctatctctctagcccagttaggttttgtttgttttcgttttgtttttaaa 441
Query: 241 tctatttattttatgtatgtgagtacactgtagctgtcttcagacacaccagaagagggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctatttattttatgtatgtgagtacactgtagctgtcttcagacacaccagaagagggc 501
Query: 301 atcagatcgcattacagatggttgtgagccaccatgtggttgccggcaattgaactctgg 360
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 502 atcagatcgcattacagatggttgtgagccaccatgtggttgctgggaattgaactctgg 561
Query: 361 acttccgaaagtgtagccagtgctcttaactgctaagccatctctccagcgcccccccct 420
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 562 acttccgaaagtgtagccagtgctcttaactgctaagtcatctctccagc-cccccccct 620
Query: 421 ttaattttttaatcagctccactctttatcttccctcttcttcccttgacagcatgggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 ttaattttttaatcagctccactctttatcttccctcttcttcccttgacaacatgggct 680
Query: 481 ttctctttctcttccctcccctttttcctcctcctacccccatgctccatccatctttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctctttctcttccctcccctttttcctcctcctacccccatgctccatccatctttcc 740
Query: 541 agacaaggtcctggtatataactacataactcaacctggcttagaacatgcaatgtagcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agacaaggtcctggtatataactacataactcaacctggcttagaacatgcaatgtagcc 800
Query: 601 taggctaccctggaattcatagcatctcccc 631
|||||||||||||||||||||||||||||||
Sbjct: 801 taggctaccctggaattcatagcatctcccc 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
