Query= MSMg01no322_c06.b1 MSMg01no322_c06.b1 CHROMAT_FILE:
MSMg01no322_c06.b1 PHD_FILE: MSMg01no322_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:02 2005
(251 letters)
>mm_chr7_151212302_151212952
Length = 651
Score = 478 bits (247), Expect = e-139
Identities = 250/251 (99%)
Strand = Plus / Plus
Query: 1 tcttctggcctccacgggtacctgcactcctgtggcatgtactcacacaggcacaagtaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tcttctggcctccacgggtacctgcactcctgtggcatgtactcacacaggcacaagtga 260
Query: 61 taaagataagtctaaaaagaggatagtgcatgcatgaacaagtgaatgctaaaagttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagataagtctaaaaagaggatagtgcatgcatgaacaagtgaatgctaaaagttact 320
Query: 121 ttgaagccggtgcctaaccaagatggacagggagggctgagtccttcaaccccaaacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaagccggtgcctaaccaagatggacagggagggctgagtccttcaaccccaaacctt 380
Query: 181 gggtgccttgctggatctttgtgtggctgagaagatgctgatagaaatcatgaatgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtgccttgctggatctttgtgtggctgagaagatgctgatagaaatcatgaatgtgtt 440
Query: 241 cggctagtgaa 251
|||||||||||
Sbjct: 441 cggctagtgaa 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_c06.g1 MSMg01no322_c06.g1 CHROMAT_FILE:
MSMg01no322_c06.g1 PHD_FILE: MSMg01no322_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:02 2005
(222 letters)
>mm_chr7_151390939_151391561
Length = 623
Score = 408 bits (211), Expect = e-118
Identities = 220/223 (98%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 1 catgacatgaactgcccggagccagcaggagagttggtggctgccaaaggctgatgagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 catgacatgaactgcccggagccagcaggagagttggtggctgccaaaggctgatgagag 305
Query: 61 agggaagcaagagactgttttgggtgccagctttatacttaaggcactagagcatattgg 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 304 agggaagcaagagactgttttgggtgccagctttatagttaaggcactagagcatattgg 245
Query: 121 aattcaatacactgagg-ttttcagaactatgtgaataaaaagaagaaaagaagaagaga 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 244 aattcaatacactgaggtttttcagaactatgtgaataaaaagaagaaaagaagaggaga 185
Query: 180 ggagaggagaggagaggagaggagaggagaggagaggagagga 222
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggagaggagaggagaggagaggagaggagaggagaggagagga 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 623
Length adjustment: 9
Effective length of query: 213
Effective length of database: 614
Effective search space: 130782
Effective search space used: 130782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
