Query= MSMg01no322_h09.b1 MSMg01no322_h09.b1 CHROMAT_FILE:
MSMg01no322_h09.b1 PHD_FILE: MSMg01no322_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:26 2005
(316 letters)
>mm_chr7_145053093_145053813
Length = 721
Score = 524 bits (271), Expect = e-153
Identities = 305/319 (95%), Gaps = 7/319 (2%)
Strand = Plus / Minus
Query: 4 ggaattcagtccatttcctctcatcacaggagcccaaaggcatgtgatcacctggattca 63
||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 521 ggaattcagtccaggtgctctcatcacaggaacccaaaggcatgtgatcacctggattca 462
Query: 64 tgagcacaagctactctc-tcggcctgggaagtttgcatgctattccttctgctcagagg 122
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tgagcacaagctact-tcatcggcctgggaagtttgcatgctattccttctgctcagagg 403
Query: 123 agctggtaactccgttctaccaactctccagagaag-----cattttccagaatcaatat 177
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 402 agctggtaactccgttctaccaactctccagagaagcatcccattttccagaatcaatat 343
Query: 178 aaaatgttcagggaagttttatgggcgagggctggagtcagcagcaggagcccttggatg 237
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 342 aaaatgttcagggaagttttatggacgagggctggagtcagcagcaggagcccttggatg 283
Query: 238 gctgtgagtgagaggtggtgtcagttggtgacagttcttgttaaagctccgtggatgatg 297
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 282 gctgtgagtgagaggtggtgtcagttggtgacagttcttgggaaagctccgtggatgatg 223
Query: 298 ctttcgaccagcgccaggt 316
|||||||||||||||||||
Sbjct: 222 ctttcgaccagcgccaggt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 721
Length adjustment: 9
Effective length of query: 307
Effective length of database: 712
Effective search space: 218584
Effective search space used: 218584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_h09.g1 MSMg01no322_h09.g1 CHROMAT_FILE:
MSMg01no322_h09.g1 PHD_FILE: MSMg01no322_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:26 2005
(294 letters)
>mm_chr7_144891083_144891776
Length = 694
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%)
Strand = Plus / Plus
Query: 1 attcatctgttttagatggccaaggaagaaaacacaatgttaattatgtatctgggatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcatctgttttagatggccaaggaagaaaacacaatgttaattatgtatctgggatag 260
Query: 61 gcagtaactgcttctctgtaagaagaaactggttgttaattaaggattaaatgatagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagtaactgcttctctgtaagaagaaactggttgttaattaaggattaaatgatagttt 320
Query: 121 tcaatgtagttagtttgacctgtgggagtagattaaatacgatttctgaagtttaaaaga 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tcaatgtagttagtttgacctgtgggagtagattaaatatgatttctgaagtttaaaaga 380
Query: 181 aaatttaaacacattaaaaattttagaacaattttgggttaaaagcacaaacattgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatttaaacacattaaaaattttagaacaattttgggttaaaagcacaaacattgtttt 440
Query: 241 aggtgtttctggtagggagaagaacaaggaagcatttaaacaaagaggcttga 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtgtttctggtagggagaagaacaaggaagcatttaaacaaagaggcttga 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
