Query= MSMg01no322_j15.b1 MSMg01no322_j15.b1 CHROMAT_FILE:
MSMg01no322_j15.b1 PHD_FILE: MSMg01no322_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:36 2005
(291 letters)
>mm_chr7_38607551_38608241
Length = 691
Score = 532 bits (275), Expect = e-155
Identities = 287/293 (97%), Gaps = 5/293 (1%)
Strand = Plus / Minus
Query: 1 cagcctgtacttatgaggatgtggggaaagaggaacgttatatacagt--ggcccagaaa 58
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 611 cagcctgtacttatgaggatgtggggaaagaggaacgttatatacagtgggg---agaaa 555
Query: 59 tataaactcctttggccagttacagaactctgtctgcaggttcctcaaaagtctaaaaat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tataaactcctttggccagttacagaactctgtctgcaggttcctcaaaagtctaaaaat 495
Query: 119 agatatacatagacaggcagtgtagggaacaacctttggaaaaatatgtcctgggagcag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agatatacatagacaggcagtgtagggaacaacctttggaaaaatatgtcctgggagcag 435
Query: 179 acacaacctgtaacatcccagactcctgagggtaatttgtggtcaggcacttcgggtaga 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acacaacctgtaacatcccagactcctgagggtaatttgtggtcaggcacttcgggtaga 375
Query: 239 gagttaaacaatgtctgctcaaatcagccagggttgggtatagtaagcacagg 291
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gagttaaacaaggtctgctcaaatcagccagggttgggtatagtaagcacagg 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_j15.g1 MSMg01no322_j15.g1 CHROMAT_FILE:
MSMg01no322_j15.g1 PHD_FILE: MSMg01no322_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:36 2005
(339 letters)
>mm_chr7_38433473_38434211
Length = 739
Score = 640 bits (331), Expect = 0.0
Identities = 337/339 (99%)
Strand = Plus / Plus
Query: 1 gcctctgatggcccccactactgctttcgttaactgctcctttttctcaacatagaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctctgatggcccccactactgctttcgttaactgctcctttttctcaacatagaatac 260
Query: 61 acccactaagaagctgcgggaaaacactcagcacggtgtgaaatcaacactttccgactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccactaagaagctgcgggaaaacactcagcacggtgtgaaatcaacactttccgactc 320
Query: 121 aaataacggggtaggctagggaaaacttccaaccttctcactgtagacattttcctcccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaataacggggtaggctagggaaaacttccaaccttctcactgtagacattttcctcccg 380
Query: 181 caagaatcacaacaaggcctccatgccaccaccagcctgtccccagcctcctgcaaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagaatcacaacaaggcctccatgccaccaccagcctgtccccagcctcctgcaaatag 440
Query: 241 aggaagccacagacctggccttttcacaggttgctatttcctcgcatatgcctcccttct 300
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 aggaagccacagacctggccttttcacaggttgctatttcctcgcatacgcctcccttcc 500
Query: 301 gccccccagcccttcacattcttaatcctggaaccctga 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccccccagcccttcacattcttaatcctggaaccctga 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
