Query= MSMg01no322_k08.b1 MSMg01no322_k08.b1 CHROMAT_FILE:
MSMg01no322_k08.b1 PHD_FILE: MSMg01no322_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:39 2005
(193 letters)
>mm_chr7_89583552_89584143
Length = 592
Score = 344 bits (178), Expect = 2e-99
Identities = 187/190 (98%), Gaps = 1/190 (0%)
Strand = Plus / Minus
Query: 1 gagtcatgagagttgcatcttcacctctagtcctcagacggtgagtattcttgtcttact 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gagtcatgagagttacatcttcacctctagtcctcagacggtgagtattcttgtcttact 330
Query: 61 acttcgactacactgaatataaacagtgtcatcagagagtcttacctcacacccattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acttcgactacactgaatataaacagtgtcatcagagagtcttacctcacacccattctg 270
Query: 121 aaagaccacacagcttcatttagggatgaggcgtgaggtgtgtgtactgtaggtgtgaat 180
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 269 aaagaccacacggcttcatttagggatgaggcgtgaggtgtgtgtactg-aggtgtgaat 211
Query: 181 gtctacttct 190
||||||||||
Sbjct: 210 gtctacttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 592
Length adjustment: 8
Effective length of query: 185
Effective length of database: 584
Effective search space: 108040
Effective search space used: 108040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_k08.g1 MSMg01no322_k08.g1 CHROMAT_FILE:
MSMg01no322_k08.g1 PHD_FILE: MSMg01no322_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:39 2005
(288 letters)
>mm_chr7_89417977_89418664
Length = 688
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 ctgctggactttactgacggatattcctgagctatttaggggcatcttgaaatcttctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgctggactttactgacggatattcctgagctatttaggggcatcttgaaatcttctgc 260
Query: 61 atcatctccctttcctggcgccaccctgcgtttatcagggtcataccattctgctactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcatctccctttcctggcgccaccctgcgtttatcagggtcataccattctgctactct 320
Query: 121 gcattagcacggtagggcacaggaggggcaggtgttttctggggcctctcaagtgtcagc 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcattggcacggtagggcacaggaggggcaggtgttttctggggcctctcaagtgtcagc 380
Query: 181 gcagcatgtggcccagacaaacactgagagcaaggcacctcatgaaagaaagtcttccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagcatgtggcccagacaaacactgagagcaaggcacctcatgaaagaaagtcttccac 440
Query: 241 taggcttacttagtgtctgagagggttagcatccatgttgacaga 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggcttacttagtgtctgagagggttagcatccatgttgacaga 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
