Query= MSMg01no323_h03.b1 MSMg01no323_h03.b1 CHROMAT_FILE:
MSMg01no323_h03.b1 PHD_FILE: MSMg01no323_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:59 2005
(178 letters)
>mm_chr7_118851834_118852411
Length = 578
Score = 329 bits (170), Expect = 7e-95
Identities = 173/174 (99%)
Strand = Plus / Minus
Query: 2 aaaaggggtgaaacaaaccaggtttggttcacatatagacaactttatttagtttatttt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaaaggggtgaaacaaaccaggtttggttcacatatagacaactttatttagtttatttt 316
Query: 62 tttctcacagagaaacacagaattggacctgaattggacccactgaagaaaaagttgatt 121
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tttctcagagagaaacacagaattggacctgaattggacccactgaagaaaaagttgatt 256
Query: 122 cttttttatataagtgaaatgatctctttatagtatttgggggaaatatgtgag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cttttttatataagtgaaatgatctctttatagtatttgggggaaatatgtgag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no323_h03.g1 MSMg01no323_h03.g1 CHROMAT_FILE:
MSMg01no323_h03.g1 PHD_FILE: MSMg01no323_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:59 2005
(621 letters)
>mm_chr7_118683555_118684574
Length = 1020
Score = 1042 bits (539), Expect = 0.0
Identities = 600/626 (95%), Gaps = 13/626 (2%)
Strand = Plus / Plus
Query: 1 gagaattttcntcnatgaancaggactgttaagatcttcaacaattgtgctataaaatca 60
|||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagaattttcttctatgaatcaggactgttaagatcttcaacaattgtgctataaaatca 260
Query: 61 gactttctctagatgcttaactacaggaaaaaataggtgcatcctgctttactattgggc 120
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 261 gactttctctagatgcttaactacag-aaaaagtaggtgcaacctgctttactattgggc 319
Query: 121 acttactgtgtttctctactctatatgtctgtacagtatattttaaactatatattcaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 acttactgtgtttctctactctatatgtctgtacagtatattttaaactataaattcaat 379
Query: 181 ttctttcatgatcatgggccaggttttatttttttcctgtgtcagttttaataaaaaaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 380 ttctttcatgatcatgggccaggttttatttttttcctgtgtcagttttaataaaaaa-t 438
Query: 241 atcatttcacaaatttgtgtttttgttgacatttt----ttttttatagcataaacttgt 296
|||||||||||||||| |||||||||||||||||| || |||||||||||||||
Sbjct: 439 atcatttcacaaatttatgtttttgttgacattttcaaatt----atagcataaacttgt 494
Query: 297 ttgttatatgttcttaattatagatacccatatctttgaaacttttcttattcccaacat 356
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 495 ttgttatatgttcttaattatagatacccatatcaatgaaacttttcttattcctaacat 554
Query: 357 ttatttatctctgcgccttgtctcttctcctgttaaagttctgcaatttgattgttttat 416
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 555 ttatttatctctgcaccttgtctcttctcctgttaaagttctgcaatttgattattttat 614
Query: 417 caaataaataagttttggctttataaatcttttt-attatattcatacacataaacatgt 475
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 615 caaataaataagttttggctttataaatcttttttattatattcatacacataaacatgt 674
Query: 476 ttatgtgtatatatgtatgtgtacctgctgctttattattttttgttcttatctttataa 535
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 675 ttatgtgtatatatgtatgtgtacctgctgctttatcattttttgttcttatctttataa 734
Query: 536 tttcttctttagtttaaacaaaagaggaactttattatgtgagtatgcttgaaagatccc 595
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 735 tttcttctttagtttaaacaaaagaggaactttattatg--agtatgcttgaaagatccc 792
Query: 596 aacaactgtaatgggccatcaactac 621
||||||||||||||||||||||||||
Sbjct: 793 aacaactgtaatgggccatcaactac 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1020
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1010
Effective search space: 617110
Effective search space used: 617110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
