Query= MSMg01no324_b03.b1 MSMg01no324_b03.b1 CHROMAT_FILE:
MSMg01no324_b03.b1 PHD_FILE: MSMg01no324_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:17 2005
(523 letters)
>mm_chr7_25844488_25845410
Length = 923
Score = 915 bits (473), Expect = 0.0
Identities = 509/521 (97%), Gaps = 2/521 (0%)
Strand = Plus / Plus
Query: 4 gaattcctgatccatctctctctacctaccaaatgttgggattataggcatatgccacca 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcctgatccatctgtctctacctaccaaatgttgggattataggcatatgccacca 263
Query: 64 tgcttggcttgtctgagaggagttaaccgacatggccagttgtcttcctgagcttgccaa 123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 tgcttggcttgtctgagaggagttaaccgagatggccagttgtcttcctgagcttgccaa 323
Query: 124 gtctgtgtggctaaggtaagtgggcaaggcatccactggcaccatctacgtgtgaatggg 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 324 gtctgtgtggctaaggtaagtgggcaaggcatccactggcaccatctatgtgtgaatggg 383
Query: 184 gcactttatgttacgggagaatgaacacagggtaggcgaggagacggaggagtttaagta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcactttatgttacgggagaatgaacacagggtaggcgaggagacggaggagtttaagta 443
Query: 244 ttgatcctgggcacagaaagcacagagctctgatctgagagcctggttctag-agtttcc 302
||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||
Sbjct: 444 ttgatcctgggcacagaaagcacagagctctgagctgagagcctggttctagta-tttcc 502
Query: 303 tggctggatggccacgtctcaacaacccctttctgagcttgggattcctccacccaagag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tggctggatggccacgtctcaacaacccctttctgagcttgggattcctccacccaagag 562
Query: 363 gaacggaggaatggctgtctccaccttgaggacagctctggggatcaaggggataacgca 422
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaacggaggaatggttgtctccaccttgaggacagctctggggatcaaggggataacgca 622
Query: 423 ccccaaaacaaaggcagtactgagagctactcggagtagtgactctgtctccaaacaaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 623 ccccaaaacaaaggcagtactgagagctactcggagtagtgactctgtctctaaacacat 682
Query: 483 caataaaataaaatagggagcacaagttaggtctctcagcc 523
|||||||||||||||| |||||||||||||||| ||||||
Sbjct: 683 aaataaaataaaataggaagcacaagttaggtctttcagcc 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_b03.g1 MSMg01no324_b03.g1 CHROMAT_FILE:
MSMg01no324_b03.g1 PHD_FILE: MSMg01no324_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:17 2005
(511 letters)
>mm_chr7_26019657_26020567
Length = 911
Score = 949 bits (491), Expect = 0.0
Identities = 506/515 (98%), Gaps = 8/515 (1%)
Strand = Plus / Minus
Query: 1 agagactgaactcaggacttgaagctcgcatggcaagcacatttatataccatagcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 agagactgaactcaggacttgaagctcgcatggcaagcacatttatataccatagcagct 652
Query: 61 caccagcttgagcctgggatttcattggaacttaagcatgggcccaaggagaggggggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 caccagcttgagcctgggatttcattggaacttaagcatgggcccaaggagaggggggag 592
Query: 121 gaagagaatgattgggaggggggaatatacattccagaaaagctgagagctaatgtttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gaagagaatgattgggaggggggaatatacattccagaaaagctgagagctaatgtttac 532
Query: 181 tgggcatttcctcagtgtaagtgcttgacaggcaagtttctaatttaatttacctggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tgggcatttcctcagtgtaagtgcttgacaggcaagtttctaatttaatttacctggaga 472
Query: 241 gtctctga----ttttaggtactgctgccatttctgttctaagtcagcagaaatgaagct 296
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtctctgagggc----aggtactgctgccatttctgttctaagtcagcagaaatgaagct 416
Query: 297 gcatagtgaggcccctttaggagtaagctgtggcctgtttgactcacaagtcctcctcaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gcatagtgaggcccctttaggagtaagctgtggcctgtttgactcacaagtcctcctcaa 356
Query: 357 ccctgtggtcacatctcttccagaagaaaaaggttggtaaggttgatgctggcagctctg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ccctgtggtcacatctcttccagaagaaaaaggttggtaaggttgatgctggcagctctg 296
Query: 417 aaggtggtacagaatggagtccatcccttaaggtgctcactaagccacatgtcttggtgc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aaggtggtacagaatggagtccatcccttaaggtgctcactaagccacatgtcttggtgc 236
Query: 477 agggatgtctctggagggaagcatgcttgctgtaa 511
|||||| ||||||||||||||||||||||||||||
Sbjct: 235 agggatatctctggagggaagcatgcttgctgtaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
