Query= MSMg01no324_g16.b1 MSMg01no324_g16.b1 CHROMAT_FILE:
MSMg01no324_g16.b1 PHD_FILE: MSMg01no324_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:44 2005
(625 letters)
>mm_chr7_117066453_117067478
Length = 1026
Score = 1094 bits (566), Expect = 0.0
Identities = 605/619 (97%), Gaps = 3/619 (0%)
Strand = Plus / Minus
Query: 9 gaattctttatggccactctctatttgactcacagcagtgggagagaagctaccaagcat 68
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaattctttatggacactctctatttgactcacagcagtgggagagaagctaccaagcat 767
Query: 69 tattgggtggatctagatattttagttgctttcctgattctggttggaaaaactgccccc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tattgggtggatctagatattttagttgctttcctgattctggttggaaaaactgccccc 707
Query: 129 aaccctctttttaaaagatgagccaaggggtaagagatgaaaatgtgtgcctttcatttt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aaccctctttttaaaagatgagccaaggggtaagagatgaaaatgtgtgcctttcatttt 647
Query: 189 gtcagctttgtaaaggacccttgactagatgagttgattttgttttgattttcttttttg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gtcagctttgtaaaggacccttgactagatgagttgattttgttttgattttcttttttg 587
Query: 249 atggcttggcctaagagcattaataatgttttaaaaaagtagtctatttttaggttataa 308
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 586 atggcttggcctaagagcattaataatgtta-aaaaaagtagtctatttttaggttataa 528
Query: 309 atatttgttggcctttaattaggcagagtcaacattatctagttggaggaactcagaagt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 atatttgttggcctttaattaggcagagtcaacattatctagttggaggaactcagaagt 468
Query: 369 aaagcccaaagtggttcttcttagtttttggaggtttgagatggaaagctttcttttatc 428
|| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 467 aaggtttaaagtggttcttcttagtttttggatgtttgagatggaaagctttcttttatc 408
Query: 429 gtcacaggttggaagggtgattgatgcactcagcataaacgatgcagggtccgttcaaaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtcacaggttggaagggtgattgatgcactcagcataaacgatgcagggtccgttcaaaa 348
Query: 489 tgcagctgtaggagatgagttttgtggaatgactgt--tagtgagcttatgttatcctct 546
||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||||||||
Sbjct: 347 tgcagctgtaggagatgagttttatggattgactgtgttagcgagcttatgttatcctct 288
Query: 547 gcctgcttcttttanaacgtaaaggctattgagacaaggttaaacttgtgtgtcactggg 606
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gcctgcttcttttagaacgtaaaggctattgagacaaggttaaacttgtgtgtcactggg 228
Query: 607 acatcatttggcatattgg 625
|||||||||||||||||||
Sbjct: 227 acatcatttggcatattgg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_g16.g1 MSMg01no324_g16.g1 CHROMAT_FILE:
MSMg01no324_g16.g1 PHD_FILE: MSMg01no324_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:44 2005
(653 letters)
>mm_chr7_116905810_116906862
Length = 1053
Score = 1203 bits (622), Expect = 0.0
Identities = 640/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Plus
Query: 1 cttttatccataaagaatgaagctatgccatttgcaggaaaatggatgcaactggagatc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 202 cttttatccataaagaatgaagctatgccatttgcaggaaaatggatgcaactggaga-c 260
Query: 61 atcatagtgagtaaattaaaccagtttcagaaagacaaagacttgatgttttctctcttt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 atcatagtgagtaaattaaaccagtttcagaaagacaaagaattgatgttttctctcttt 320
Query: 121 tgtgtgtcttctttcagaagggcacagacagtcagagaaacagatgacatcaggtagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgtcttctttcagaagggcacagacagtcagagaaacagatgacatcaggtagtga 380
Query: 181 agctgttggggcaacagtgggagctgactgagcagtgaagagtgaggaagtacatttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 agctgttggggcaacagtgggagctgactgagcagtgaagagtgaggaagtgcatttaca 440
Query: 241 tgcctgtatgaaaacagccttatgtcatcaagattattaaaattttaattacatgtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcctgtatgaaaacagccttatgtcatcaagattattaaaattttaattacatgtgttt 500
Query: 301 atttatgggggcatacctgtgccgtggaacacatgtggaaatgcgagatcaaacacaggc 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 atttatgggggcatacctgtgccgtggaacacatgtggaaatgtgagatcaaacacaggc 560
Query: 361 tgtcagtttgattccaaccatcttaatccactgagcaattccactggctccgttctattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtcagtttgattccaaccatcttaatccactgagcaattccactggctccgttctattt 620
Query: 421 ttaaagatttaatgtttctgtgtgtgcctaagtatgtatgtacatcacatgtgtacaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaagatttaatgtttctgtgtgtgcctaagtatgtatgtacatcacatgtgtacaaaa 680
Query: 481 gcctgaggatgccagaagaaggtgtcagatcccttggcactggagtcacaggtggttgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcctgaggatgccagaagaaggtgtcagatcccttggcactggagtcacaggtggttgtg 740
Query: 541 agtcatcctatatagatgctgggaacctaatctgagtcttttgaaagggcaggaaatact 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agccatcctatatagatgctgggaacctaatctgagtcttttgaaagggcaggaaatact 800
Query: 601 ctaaaccactatgccatctagcctctggtaaattaactaattaatt 646
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 801 ctaaaccactatgccatctagcccctggtaaattaactaattaatt 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
