Query= MSMg01no324_p18.b1 MSMg01no324_p18.b1 CHROMAT_FILE:
MSMg01no324_p18.b1 PHD_FILE: MSMg01no324_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:26 2005
(693 letters)
>mm_chr7_114181489_114182582
Length = 1094
Score = 1315 bits (680), Expect = 0.0
Identities = 686/688 (99%), Gaps = 1/688 (0%)
Strand = Plus / Plus
Query: 6 gaattc-atacaaataccctcatactgtgccatgttgatcagaccacatttgaaacatcc 64
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaatacaaatagcctcatactgtgccatgttgatcagaccacatttgaaacatcc 265
Query: 65 ttcacttagatacacattgataaactaaaaagtttatacaaaggtaatcacactccttac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttcacttagatacacattgataaactaaaaagtttatacaaaggtaatcacactccttac 325
Query: 125 atacttttagactggaagggttcaagtgaggagaggagagatatttataaaagagggttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atacttttagactggaagggttcaagtgaggagaggagagatatttataaaagagggttt 385
Query: 185 gcacaaacattcacataaatcagtaaagccactagcagccagaagagtcatacactagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gcacaaacattcacataaatcagtaaagccactagcagccagaagagtcatacactagag 445
Query: 245 tgtaggtgaacacagcccaaaagccatcactatgtgccataagtcatatgcagtgtgatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgtaggtgaacacagcccaaaagccatcactatgtgccataagtcatatgcagtgtgatg 505
Query: 305 aaagggttatttagaatatactgggtaaatatatgttcaactaaagagaccacaacacac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaagggttatttagaatatactgggtaaatatatgttcaactaaagagaccacaacacac 565
Query: 365 catgtcagacatgaagattctatagaataaagttgcagatagctaaaactaaggggtgag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 catgtcagacatgaagattctatagaataaagttgcagatagctaaaactaaggggtgag 625
Query: 425 ggccaggtggaggacttggaaatggggtagaattggtgctttccttcatcttttttaaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ggccaggtggaggacttggaaatggggtagaattggtgctttccttcatcttttttaaca 685
Query: 485 cagattctctaccttaagtatcctgtgtcttattcaccttgtttttggtagcaatcaaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 cagattctctaccttaagtatcctgtgtcttattcaccttgtttttggtagcaatcaaca 745
Query: 545 tttttctgaaattattaaacactttgaacttgtaataaataccttcatttgaatggtcct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tttttctgaaattattaaacactttgaacttgtaataaataccttcatttgaatggtcct 805
Query: 605 aaataagtgttcaagaattttctttgtaacacgtagtcttaaagtagaaaacaaaaccac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aaataagtgttcaagaattttctttgtaacacgtagtcttaaagtagaaaacaaaaccac 865
Query: 665 atattctgctaatatctcatcttttgaa 692
||||||||||||||||||||||||||||
Sbjct: 866 atattctgctaatatctcatcttttgaa 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1094
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1084
Effective search space: 740372
Effective search space used: 740372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_p18.g1 MSMg01no324_p18.g1 CHROMAT_FILE:
MSMg01no324_p18.g1 PHD_FILE: MSMg01no324_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:26 2005
(664 letters)
>mm_chr7_114352111_114353174
Length = 1064
Score = 1048 bits (542), Expect = 0.0
Identities = 579/608 (95%), Gaps = 27/608 (4%)
Strand = Plus / Minus
Query: 1 aaaagccgttaggcgaagaagaaagaaagttccattgctcttaatgagaagaatcccaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaaagccgttaggcgaagaagaaagaaagttccattgctcttaatgagaagaatcccaaa 537
Query: 61 gcattccaaacctagttacccacacgagtttaaaacaaacaaacaaacaaacaaacaaac 120
|||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 536 gcattccaaacctagttacccacacgagttta------------aaacaaacaaacaaac 489
Query: 121 aaacaaacaaccccctggaaaatgaaattaggagtcgtttaaaagatttagaacggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aaacaaacaaccccctggaaaatgaaattaggagtcgtttaaaagatttagaacggagtt 429
Query: 181 tgtatataaagcttagtcatgagatgcggggtttattttttcccctgaagggaagaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgtatataaagcttagtcatgagatgcggggtttattttttcccctgaagggaagaaggt 369
Query: 241 gttggaaggggaatcaacagtggaatagatggatttac---------------ttattat 285
|||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 368 gttggaaggggaatcaacagtggaatagatggatttacttattattattattattattat 309
Query: 286 tattattattattattattattatttacttaaacctttgtccgtttggtctcatatgtgt 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tattattattattattattattatttacttaaacctttgtccgtttggtctcatatgtgt 249
Query: 346 acacgaaaatggttttcacatttcttcctgccagtttgtaaggtttaatcctaaccatga 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 acacgaaaatggttttcacatttcttcctgccagtttgtaaggtttaatcctaaccatga 189
Query: 406 ttattttgtctatttctcctcctttttaaaacttctcttataaaatggtttgtcatattt 465
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttatcttgtctatttctcctcctttttaaaacttctcttataaaatggtttgtcatattt 129
Query: 466 ttcctcagctgtggaagaagtttcttattccattttctctaatgttctctaagtttataa 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 ttcctcagctgtggaagaagtttcttattccattttctctaatgttctctaagtttataa 69
Query: 526 atgtgcttagtttgatgcctaatctttcacgggtgtgtgtatccatgtaaccatgacccc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 atgtgcttagtttgatgcctaatctttcacgggtgtgtgtatccatgtaaccatgacccc 9
Query: 586 cacacgtc 593
||||||||
Sbjct: 8 cacacgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
