Query= MSMg01no325_k11.b1 MSMg01no325_k11.b1 CHROMAT_FILE:
MSMg01no325_k11.b1 PHD_FILE: MSMg01no325_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:12 2005
(468 letters)
>mm_chr7_122683335_122684204
Length = 870
Score = 814 bits (421), Expect = 0.0
Identities = 457/473 (96%), Gaps = 8/473 (1%)
Strand = Plus / Minus
Query: 1 aggctgctgagctcaggccgggaacctcccctttgtttcaatcctcagtgactgtggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aggctgctgagctcaggccgggaacctcccctttgtttcaatcctcagtgactgtggtga 611
Query: 61 ggagacatggcagagtttgcacaatggagaaaagcttgtggtttccccagttccctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggagacatggcagagtttgcacaatggagaaaagcttgtggtttccccagttccctgcag 551
Query: 121 ggcttttctgtttgctcctgaagaagttggaagtgtatggtgctttttgtagtcccctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggcttttctgtttgctcctgaagaagttggaagtgtatggtgctttttgtagtcccctgt 491
Query: 181 gtggtgtgatcatctggaagctcaggtgtaaaaccctttcctaagtaaggacgcgttggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 490 gtggtgtgatcatctggaagctcaggtgtaaaaccctttcctaagtaaggacgcattggc 431
Query: 241 ttgaatagagaggcagggacttcagctatgtggctctggaggccagtccccaagctgtgc 300
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgtatagagaggcagcgacttcagctatgtggctctggaggccagtccccaagctgtgc 371
Query: 301 tctctgcagctctcctggcatgacctcccc-----tggcttcctggcttctaattgttgc 355
|||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 370 tctctgcagctctcctggcatgacctcccccttatt---ttcctggcttctaattgttgc 314
Query: 356 aggaaccctggtttgtgcctactctacctcgatttcctcctgtcttttctatatgccttc 415
||||||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 313 aggaaccctggcttgtgtctattctacatcgatttcctcctgtcttttctatatgccttc 254
Query: 416 tgtcttatgtgtctattttctaacccatctaatctgttgtgaccttactctaa 468
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgtcttatgtgtctactttctaacccatctaatctgttgtgaccttactctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 870
Length adjustment: 10
Effective length of query: 458
Effective length of database: 860
Effective search space: 393880
Effective search space used: 393880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_k11.g1 MSMg01no325_k11.g1 CHROMAT_FILE:
MSMg01no325_k11.g1 PHD_FILE: MSMg01no325_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:12 2005
(176 letters)
>mm_chr7_122526845_122527420
Length = 576
Score = 265 bits (137), Expect = 1e-75
Identities = 167/179 (93%), Gaps = 6/179 (3%)
Strand = Plus / Plus
Query: 1 attcacaaatcaaggatcatcctgaacgccaggtcttctgagaagagcacaagaatgcag 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 attcacaaatcaaggatcatcctgaacgccaggtcttctgataagagcacaagaatgcag 260
Query: 61 tctttgcatagtccctggttacacggt--ca-gcatcacttgctctaggcaatgctaatc 117
||||||||||||||||||| ||| | || | ||||| ||||||||||||||||||||
Sbjct: 261 tctttgcatagtccctggtcaca---ttgcaagtatcacctgctctaggcaatgctaatc 317
Query: 118 ccctaatgacagtgaagctgacagagaatgagggtcagttaaaactgcaggcctaggta 176
|||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 318 ccctaatgacagtgaagctgtcagagactgagggtcagttaaaactgcaggcctaggta 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
