Query= MSMg01no326_m10.b1 MSMg01no326_m10.b1 CHROMAT_FILE:
MSMg01no326_m10.b1 PHD_FILE: MSMg01no326_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:32 2005
(352 letters)
>mm_chr7_120987512_120988263
Length = 752
Score = 634 bits (328), Expect = 0.0
Identities = 346/352 (98%)
Strand = Plus / Plus
Query: 1 tactcatccctaacaggagggattgagagtggagcttctcctgagggcaaggtggcccat 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tactcatccctaacaggagggattaagagtggagcttctcctgagggcaaggtggcccat 260
Query: 61 atgaggaatccaactttacaaaacaataatgacaagagccaagcaagcgctatcctggct 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 atgaggaatccaactttacaaaacaataatggcaagagccaagcaagcgctatcctggct 320
Query: 121 tacaaacacttatttcctctgtaaagcatccttgtggtgtagatgctaaggagaaagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaaacacttatttcctctgtaaagcatccttgtggtgtagatgctaaggagaaagctc 380
Query: 181 aggcccagggaggctagataacttctcacggtcacagagtagccaaccatggttagaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcccagggaggctagataacttctcacggtcacagagtagccaaccatggttagaagc 440
Query: 241 attgaggccttagatctctgatttggaccttagacttcaaggcctcagacaggagctgtg 300
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||
Sbjct: 441 attgaggccttagatctctgatttggacattagacttcaaggcctcagacaggaactatg 500
Query: 301 ggtcaggctgagattccacatctcagcttgacatctccggtaggcaggcctt 352
||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ggtcaggctgagattccacatctcagcttgacatcgccggtaggcaggcctt 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_m10.g1 MSMg01no326_m10.g1 CHROMAT_FILE:
MSMg01no326_m10.g1 PHD_FILE: MSMg01no326_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:32 2005
(274 letters)
>mm_chr7_121163551_121164224
Length = 674
Score = 464 bits (240), Expect = e-135
Identities = 261/268 (97%), Gaps = 2/268 (0%)
Strand = Plus / Minus
Query: 1 tctttccctgtctctacccgaacgttgggctgtcagggctctggcttgatttattgaatc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 463 tctttccctgtctctacccgaacattgggctgtcagggctctggcttgatttattgaatc 404
Query: 61 aaacatgccaccattgattcgttcatccgctcctgccctttgagaaggggtgctgggaat 120
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aaacatgtcaccgttgattcgttcatccgctcctgccctttgagaaggggtgctgggaat 344
Query: 121 gcggatgaagactgctgagaaaaaaagtcagtttcaacaggcagtgctttgcaaagtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcggatgaagactgctgagaaaaaaagtcagtttcaacaggcagtgctttgcaaagtagg 284
Query: 181 tcaccctggcttttccactgggtgaagaggctggaatcccattaacctccatcagacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcaccctggcttttccactgggtgaagaggctggaatcccattaacctccatcagacttg 224
Query: 241 catgtatggggatggggtgggggcgggg 268
|| | |||||||||||| ||||| ||||
Sbjct: 223 cagggatggggatgggg-ggggg-gggg 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
