Query= MSMg01no327_c01.b1 MSMg01no327_c01.b1 CHROMAT_FILE:
MSMg01no327_c01.b1 PHD_FILE: MSMg01no327_c01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:58 2005
(658 letters)
>mm_chr7_6688426_6689484
Length = 1059
Score = 1212 bits (627), Expect = 0.0
Identities = 646/653 (98%), Gaps = 3/653 (0%)
Strand = Plus / Minus
Query: 8 gaattcaaaatcttacacacattcctttactccattaatggaaacaaagtgcagatctga 67
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaattcaaaatcgtaaacacattcctttactccattaatggaaacaaagtgcagatctga 776
Query: 68 accacgatgaggtatgtgggatctggttcaagtggcacttggaggagaatttatagcctt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 accacgatgaggtatgtgggatctggttcaagtggcacttggaggagaatttatagcctt 716
Query: 128 ggattcatatgttaaaaattaagagaaaataaaaataaatgagataaatatgcaactcaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggattcatatgttaaaaattaagagaaaataaaaataaatgagataaatatgcaactcaa 656
Query: 188 gaagctagaaaaaggagctcaaataactaggaaagaaatcaaaagtaaattaaatgacaa 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gaagctagaaaaaggagctcaaataactaggaaagaaatcaaaagtaaattaaatgacaa 596
Query: 248 agaagaaagaatgtggtcggtagaatcaaaagccacttttacaaaaaaaaacaaagacat 307
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 595 agaagaaagaatgtggtcggtagaatcaaaagccacttttac-aaaaaaaacaaagacat 537
Query: 308 caagtctttggcaaagctggggg--agaaaaaaaaaccaaaacagcaaaaaacccaagaa 365
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 536 caagtctttggcaaagctgggggaaaaaaaaaaaaaccaaaacagcaaaaaacccaagaa 477
Query: 366 ctgtatcaataaaaaatataattcccattggaaagaaaagattataaactgtaaagtatt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctgtatcaataaaaaatataattcccattggaaagaaaagattataaactgtaaagtatt 417
Query: 426 ttataaggcttgtataactttgatacccaagccagacaaggacaatataataataataaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttataaggcttgtataactttgatacccaagccagacaaggacaatataataataataaa 357
Query: 486 agtgtgaaatgagacacaaaaaatgggatccagctgcacatgtggataaaccagaacctc 545
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agtgtgaagtgagacacaaaaaatgggatccagctgcacatgtggataaaccagaacctc 297
Query: 546 ataagcacggttaagtagggcttaggaatgtaaacacattttaatctcagaaactgctgt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ataagcacggttaagtagggcttaggaatgtaaacacattttaatctcagaaactgctgt 237
Query: 606 gattcacatccttagtagataggacatcatcaaatctcaacaaatacagaaaa 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gattcacatccttagtagataggacatcatcaaatctcaacaaatacagaaaa 184
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1059
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1049
Effective search space: 679752
Effective search space used: 679752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_c01.g1 MSMg01no327_c01.g1 CHROMAT_FILE:
MSMg01no327_c01.g1 PHD_FILE: MSMg01no327_c01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:58 2005
(672 letters)
>mm_chr7_6486603_6487675
Length = 1073
Score = 880 bits (455), Expect = 0.0
Identities = 479/487 (98%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 1 attctcctaagtgatgataatcaaccttttccgcttctttctcttcttttgtctgctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctcctaagtgatgataatcaaccttttccgcttctttctcttcttttgtctgctgtt 260
Query: 61 caaagagctggatgtcctcagtctctgtaacaggctctgctgcctcctttggatttggtg 120
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 caaagagctggatgtcctctgtctctgtaactggctctgctgcctcctttggatttggtg 320
Query: 121 actcttcttctgagtaaccttgtgcatactgaataagattgtgattttcagtagttggag 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcttcttctgagtaaccttgtacatactgaataagattgtgattttcagtagttggag 380
Query: 181 gtacaaccaccccttgtgttaccaaatacttaaatatgacttctcagtggacttttttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacaaccaccccttgtgttaccaaatacttaaatatgacttctcagtggacttttttga 440
Query: 241 gcctcagaagttcttctacatgttggctacacactaatattgcacaaatagcatcttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctcagaagttcttctacatgttggctacacactaatattgcacaaatagcatcttgga 500
Query: 301 ggtccacaggctgcaccaggtggtggtgatggtgtcccaaagggccatgatctcatcact 360
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 ggtccacaggctgcactaggtggtggtgatggtgtcccaaagggccatgatctcatcatt 560
Query: 361 gtccagcatgccaaataggtttcggcatccctctgactctaagtggctaagctctgacat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 gtccagcatgccaaataggtttcggcatccctctgactctaagtggctaagctccgacat 620
Query: 421 cttgaccccggccgatgggggcagaggacgctcatggaccgtgg-ctggccggcgaaata 479
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 621 cttgaccccggccgatgggggcagaggacgctcatggaccgtgggctggccggtgaaata 680
Query: 480 tttcttt 486
|||||||
Sbjct: 681 tttcttt 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1073
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1063
Effective search space: 703706
Effective search space used: 703706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
