Query= MSMg01no327_k11.b1 MSMg01no327_k11.b1 CHROMAT_FILE:
MSMg01no327_k11.b1 PHD_FILE: MSMg01no327_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:36 2005
(683 letters)
>mm_chr7_120318004_120319086
Length = 1083
Score = 752 bits (389), Expect = 0.0
Identities = 418/429 (97%), Gaps = 4/429 (0%)
Strand = Plus / Plus
Query: 7 ggaattctaagtgtgctccaccatgcccagctatttacatggatgccccgactcagacta 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattctaagtgtgctccaccatgcccagctatttacatggatgccccgactcagacta 266
Query: 67 ctggctgagctctcccaggcccctgtcaagtattttagaagagtgattaaaaaaaatgac 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 267 ctggctgagctctcccaggcccctgtcaagtattttagaagagtgattaaaaaaaataac 326
Query: 127 taacagattccacctacattcaaaatcaggctgtttatcgttttactgtcaacggtctaa 186
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |
Sbjct: 327 taacagattccacctacattcaaaatcaggctgtttatcgttttactgtaaacgttctga 386
Query: 187 gatcccagcccacctccactactcagaagccattgtagaactggaggccctgtgtgagtt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gatcccagcccacctccactactcagaagccattgtagaactggaggccctgtgtgagtt 446
Query: 247 gactcagcccaagcctgcagcctggtctctttggactcctcccacaaacacctaggagca 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gactcagcccaagcctgcagcctggtctctttggactcctcccacaaacacctaggagca 506
Query: 307 ttgcaggaatgctgtactgtcctagaaatgcttaggaccattgttccctctcattcacat 366
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 507 ttgcagggatgctgtactgtcctagaaatgcttgggaccattgttccctctcattcacat 566
Query: 367 ccttctcccccc--ccttcacctgacaaatttcagtttgtacttcaagatctgactgaag 424
|| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 567 cc--ctccccccttccttcacctgacaaatttcagtttatacttcaagatctgactgaag 624
Query: 425 tatcccttc 433
|||||||||
Sbjct: 625 tatcccttc 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_k11.g1 MSMg01no327_k11.g1 CHROMAT_FILE:
MSMg01no327_k11.g1 PHD_FILE: MSMg01no327_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:36 2005
(343 letters)
>mm_chr7_120432774_120433516
Length = 743
Score = 644 bits (333), Expect = 0.0
Identities = 341/345 (98%), Gaps = 4/345 (1%)
Strand = Plus / Minus
Query: 1 aagtgccagaaagaaaaaggccagtatgggcagctagctgtcctaggatataaaaggcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagtgccagaaagaaaaaggccagtatgggcagctagctgtcctaggatataaaaggcca 304
Query: 61 gtgcaggcgactgtcccatgatgtgcaaagtgagaacaagaggggcagatccattcacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gtgcaggcgactgtcccatgatgtgcaaagtgagaacaagaggggcagatccattcacta 244
Query: 121 tgagaacctgtcaagccaccagccacaggaaacttgagtccctaagctgggccagggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgagaacctgtcaagccaccagccacaggaaacttgagtccctaagctgggccagggtga 184
Query: 181 aggatgacagtgagggggaagtaattttcctagcaccatctgctggaagcctcattatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aggatgacagtgagggggaagtaattttcctagcaccatctgctggaagcctcattatgt 124
Query: 241 c-aaaaaaatggatattaataacttcctcatttgccttgcagacagtcatatctcac--- 296
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caaaaaaaatggatattaataacttcctcatttgccttgcagacagtcatatctcacagg 64
Query: 297 agaactgtgttcagggtttttgctaaggtgggaatgtgacatgaa 341
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agaactgtgttcagggtttttgctaaggtgggaatgtgacatgaa 19
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
