Query= MSMg01no327_p18.b1 MSMg01no327_p18.b1 CHROMAT_FILE:
MSMg01no327_p18.b1 PHD_FILE: MSMg01no327_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:59 2005
(372 letters)
>mm_chr7_73457615_73458384
Length = 770
Score = 600 bits (310), Expect = e-176
Identities = 346/366 (94%), Gaps = 15/366 (4%)
Strand = Plus / Plus
Query: 5 gaattcatagctctgcctccccatccccaatccatcgttcctgacaggtctgtctactgg 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 218 gaattcatagctctgcctccccatccccaatccaccgttcctgacaggtctgtctactgg 277
Query: 65 actcagccctgcaagtctaagctgagtcggaaccataactcctagagactataaacccct 124
||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 actca-----------c--agctgagtcggaaccataactcctagagactataaacccct 324
Query: 125 tgacgggacagaccactgttcagtgtggtgggacataacacaccgagatgcagtttgttc 184
|| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 tggcgggacagaccactgttcagtgtggtgggacataacacaccgagaggcagtttgttc 384
Query: 185 aatcaggacacatgtgttaaaatggaggaacacacagaatactctggaattgtatgttgg 244
| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 385 agtcaggacaca--tgttaaaatggaggaaaacacagaatactctggaattgtatgttgg 442
Query: 245 cccttggaccacagcaacccccaagctttcttagctcagcagaggttctcagatgatggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cccttggaccacagcaacccccaagctttcttagctcagcagaggttctcagatgatggc 502
Query: 305 tgaagatggcttctcttcaatttggggcttctgaatatttatctaaagctacccatgctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgaagatggcttctcttcaatttggggcttctgaatatttatctaaagctacccatgctt 562
Query: 365 tggtta 370
||||||
Sbjct: 563 tggtta 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 770
Length adjustment: 9
Effective length of query: 363
Effective length of database: 761
Effective search space: 276243
Effective search space used: 276243
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_p18.g1 MSMg01no327_p18.g1 CHROMAT_FILE:
MSMg01no327_p18.g1 PHD_FILE: MSMg01no327_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:59 2005
(343 letters)
>mm_chr7_73637899_73638641
Length = 743
Score = 625 bits (323), Expect = 0.0
Identities = 338/343 (98%)
Strand = Plus / Minus
Query: 1 ctgccacaaaggctgccccacctcggtggactttaccttcaaactgtaagccaaaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctgccacaaaggctgccccacctcggtggactttaccttcaaactgtaagccaaaataaa 599
Query: 61 ctctttctcccttagggtccatattgccaggcccttggtcggcaaaccagaaaagggagt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ctctttctcccttagggttcatattgccaggcccttggtcggcaaaccagaaaagggagt 539
Query: 121 aggtaatccagtcaggttccatttgtaaaacactctgaaaaaaaaagagaaagctacagt 180
||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||
Sbjct: 538 aggtaatccagtcaggttccatttgtataacactctgagaaaagaagagaaagctacagt 479
Query: 181 gatgaggggagataaggggccgccaggggttaaatgcaggggcgagagagattagataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gatgaggggagataaggggccgccaggggttaaatgcaggggcgagagagattagataca 419
Query: 241 aaggcacagcagggaaggactccctggggaggttagaattgtccagaaaactgcctgtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaggcacagcagggaaggactccctggggaggttagaattgtccagaaaactgcctgtgg 359
Query: 301 tgacgtttccaagactaagcatatgtaaaaactcacggaactg 343
||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 358 tgacgtttccaagactaagcatatgtaaaaactcatggaactg 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
