Query= MSMg01no328_c19.b1 MSMg01no328_c19.b1 CHROMAT_FILE:
MSMg01no328_c19.b1 PHD_FILE: MSMg01no328_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:15 2005
(377 letters)
>mm_chr7_107702156_107702932
Length = 777
Score = 638 bits (330), Expect = 0.0
Identities = 361/372 (97%), Gaps = 2/372 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgagtactgtccactccttgaggtacctgctccgaacagcagctcggaccacc 64
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattcctgagtactgtggactccttgaggtacctgctccaaacagcagctcggaccacc 264
Query: 65 ccagcacaatctcggattgcctctttccatacaaatatggtaatcaatccataatattta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagcacaatctcggattgcctctttccatacaaatatggtaatcaatccataatattta 324
Query: 125 aaagtggggacacaaccatagactctttatgaaaggtcacataaaataactctgtgggag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagtggggacacaaccatagactctttatgaaaggtcacataaaataactctgtgggag 384
Query: 185 tttgttagcagtagagagtatgagaggctacctaccctctgagcagtctgcagggaagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgttagcagtagagagtatgagaggctacctaccctctgagcagtctgcagggaagac 444
Query: 245 tgactggctagaacgaccactaaccatgccgtttacattgcaacgcttacaacattgtaa 304
||||||||||||| | |||||||||||||| |||||||||||| || | ||||||||||
Sbjct: 445 tgactggctagaatggccactaaccatgccatttacattgcaatgc--aaaacattgtaa 502
Query: 305 gcctgtaagatggctctgtggataaaggtaccaggcaccaagcctgaccatctaagttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcctgtaagatggctctgtggataaaggtaccaggcaccaagcctgaccatctaagttca 562
Query: 365 atctctgggacc 376
||| ||||||||
Sbjct: 563 atccctgggacc 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_c19.g1 MSMg01no328_c19.g1 CHROMAT_FILE:
MSMg01no328_c19.g1 PHD_FILE: MSMg01no328_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:15 2005
(657 letters)
>mm_chr7_107862915_107863971
Length = 1057
Score = 1208 bits (625), Expect = 0.0
Identities = 649/657 (98%)
Strand = Plus / Minus
Query: 1 caggacagtcagagctacacagagaaaccctgtctcgaaaaaccaaaataaatcaatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 caggacagtcagagctacacagagaaaccctgtctcgaaaaaccaaaataaatcaatcaa 725
Query: 61 taaataagccaaacacggtgaggcgtgtctctaatcccaacacttgagagagagaggcaa 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 724 taaataagccaaacacggtgaggtgtgtctctaatcccaacacttgagagagagaggcaa 665
Query: 121 gtggatctctgtgagttataggtcaggttgttctcatggtgagttctaggacagcaagac 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 664 gtggatctctgtgagttataggtcaggttgttctcatagtgagttctaggacagcaagac 605
Query: 181 agagagaactctatctcaaaaataaaccagcaaataagtaaataaatattaaataattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 agagagaactctatctcaaaaataaaccagcaaataagtaaataaatattaaataattaa 545
Query: 241 atttccctaaagccaggcaaccataataacagtgacatacactagatgttctctggaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 atttccctaaagccaggcaaccataataacagtgacatacactagatgttctctggaaac 485
Query: 301 agaatagagtgcttggtttttatgacaaccttaactcttcacaaagatccatcctatttc 360
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 484 agaatagagtgcttggtttttatgacaaccttaactcttcacaaagatttattttatttc 425
Query: 361 tttatgagtacactgtcgctgtcttcagacacaccagaagaaggcactagatccaattac 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 424 tttatgagtacactgtcgctgtcttcagacacaccagaagaaggcactggatccaattac 365
Query: 421 agatggttgtgagccactatgtggttgctcaggtcctctggaagagcagtcagtgctctc 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agatggctgtgagccactatgtggttgctcaggtcctctggaagagcagtcagtgctctc 305
Query: 481 ttcactgctgagccatctctccagctcctcaaaaatttcttaaggaatatcatttaatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ttcactgctgagccatctctccagctcctcaaaaatttcttaaggaatatcatttaatgc 245
Query: 541 aaaaagatgagcaaagtcatgaaacatcaatgtagcttagcaactacaaggcacttggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaaaagatgagcaaagtcatgaaacatcaatgtagcttagcaactacaaggcacttggtg 185
Query: 601 gtaaccagtaccatgtgtgatgagaaataaaccaggaatataagtatacactatact 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gtaaccagtaccatgtgtgatgagaaataaaccaggaatataagtatacactatact 128
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
