Query= MSMg01no328_p06.b1 MSMg01no328_p06.b1 CHROMAT_FILE:
MSMg01no328_p06.b1 PHD_FILE: MSMg01no328_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:15 2005
(281 letters)
>mm_chr7_127910544_127911224
Length = 681
Score = 505 bits (261), Expect = e-147
Identities = 273/277 (98%), Gaps = 1/277 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaaaatgaccccacagtaagtctctagcatgaggggcgcctctccagcctcca 63
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 ggaattccaaaatgacctcacagtaagtctctagcatgaggggcacctctccagcctcca 263
Query: 64 gcttccacagcctcccggcctgcaggacaaacgtgctttgtttacagcaaatgctaaaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcttccacagcctcccggcctgcaggacaaacgtgctttgtttacagcaaatgctaaaac 323
Query: 124 aggcccattcaccaaaaaaaaaaaaaaaaaaaaaagaacagttctcactcaattagcacc 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggcccattcac-aaaaaaaaaaaaaaaaaaaaaagaacagttctcactcaattagcacc 382
Query: 184 ttttggggggtgggagggggaaaagatccgtgtcaaattcagtgaaagctcaccacagac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttttggggggtgggagggggaaaagatccgtgtcaaattcagtgaaagctcaccacagac 442
Query: 244 tcattttcacttgcagagtgaacttctagtattcttc 280
|||||||||||||||| ||||||||||||||||||||
Sbjct: 443 tcattttcacttgcagtgtgaacttctagtattcttc 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no328_p06.g1 MSMg01no328_p06.g1 CHROMAT_FILE:
MSMg01no328_p06.g1 PHD_FILE: MSMg01no328_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:15 2005
(229 letters)
>mm_chr7_128065575_128066203
Length = 629
Score = 398 bits (206), Expect = e-115
Identities = 227/242 (93%), Gaps = 13/242 (5%)
Strand = Plus / Minus
Query: 1 agggacagggtacaggagctcactcaatgtcacaccacatcaagacttcaaatccaggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agggacagggtacaggagctcactcaatgtcacaccacatcaagacttcaaatccaggcc 245
Query: 61 ttggacttgggtgacagttatagatgggaagttcagtaaag-------------agttcc 107
|||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 244 ttggacttgggtgagagttatagatgggaagttcagtaaagagtgggaccctccagttcc 185
Query: 108 agttaaggagggccgtgtgcgtgggcttaaaagatggaaggaaaagaaacccacaacaca 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 agttaaggagggccgtgtgcgtgggcttaaaagatggaaggaaaagaaacccacaacaca 125
Query: 168 gagaaagggaagctggagccaaggatctggaaagggaagcccatgggcttccagctcccc 227
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 124 gagaaagggaagctggagccaaggatctggaaagggaagcccacgggcttccagctcccc 65
Query: 228 gg 229
||
Sbjct: 64 gg 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
