Query= MSMg01no330_n13.b1 MSMg01no330_n13.b1 CHROMAT_FILE:
MSMg01no330_n13.b1 PHD_FILE: MSMg01no330_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:39 2005
(235 letters)
>mm_chr7_109449053_109449687
Length = 635
Score = 412 bits (213), Expect = e-120
Identities = 228/233 (97%)
Strand = Plus / Plus
Query: 1 atattccctattttcctgtagggtagaaaataaatagtgatgcaatataatgtcagataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atattccctattttcctgtagggtagaaaataaatagtgatgcaatataatgtcagataa 260
Query: 61 ttatgagccctaggaaacaaggtaaagttagagagtaatggaaagggctaggaatatggc 120
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttataagccctaggaaacagggtaaagttagagagtaatggaaagggctaggaatatggc 320
Query: 121 tcgttggtagagtacttgtttagcatgtacaaaacactgagttaataaaactgggcttgt 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgttggtagagtgcttgtttagcatgtacaaaacactgagttaataaaactgggcttgt 380
Query: 181 tagcacatgcctgtattctcagtacttgggaggcagaggtagaaggatcagaa 233
||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 381 tagcacatgcctgtaatctcagtacttgggaggcagaggtagaaagatcagaa 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_n13.g1 MSMg01no330_n13.g1 CHROMAT_FILE:
MSMg01no330_n13.g1 PHD_FILE: MSMg01no330_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:39 2005
(290 letters)
>mm_chr7_109633375_109634061
Length = 687
Score = 480 bits (248), Expect = e-140
Identities = 279/292 (95%), Gaps = 6/292 (2%)
Strand = Plus / Minus
Query: 1 attaatgaagccgagtggtggtgcacgcctttgatcccaacactcgggacgcagacacag 60
|||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||
Sbjct: 642 attaatgaagccgagtggtggtacacgcctttgatcccagcactcgggaggcagacacag 583
Query: 61 gcagatttctgagtttgaggccagccgggtctacaaagtgagttcgaggccagccagggc 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 582 gcagatttctgagtttgaggccagccaggtctacaaagtgagttcgaggccagccagggc 523
Query: 121 tacacagacaaaccctgtctcgaaaaacc---aaaaaaaaaaagaattcattaatgaaaa 177
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 522 tacacagacaaaccctgtctcgaaaaaccaaaaaaaaaaaaaagaattcattaatgaaaa 463
Query: 178 agaagggggaaaaaaatggagggtcatggaaagtagctacttctaacatacaactcttca 237
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 462 agaaggggg---aaaatggagggccatggaaagtagctacttctaacatacaactcttca 406
Query: 238 tttcctccttagaaatgctgtagttgatgtctacacccagtccagcctggtg 289
|||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 405 tttcctccatagaaatgctgtagttaatgtctacacccagtccagcctggtg 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 687
Length adjustment: 9
Effective length of query: 281
Effective length of database: 678
Effective search space: 190518
Effective search space used: 190518
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
