Query= MSMg01no330_p18.b1 MSMg01no330_p18.b1 CHROMAT_FILE:
MSMg01no330_p18.b1 PHD_FILE: MSMg01no330_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:49 2005
(315 letters)
>mm_chr7_108136678_108137392
Length = 715
Score = 569 bits (294), Expect = e-166
Identities = 307/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagggacaggaagtgcaagctggaggaatgtgtggagtgaagagggaaaagga 63
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccggggacaggaagtgcaagctggaggaatgtgtggagtgaagagggaaaagga 263
Query: 64 gagaaggcagctagatcctgtccatactcccgtttcttctgccagccccctcgtgccact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagaaggcagctagatcctgtccatactcccgtttcttctgccagccccctcgtgccact 323
Query: 124 cccccaggcctgtcttctgtccccaacgccaacctgttccctcagcacactctttttctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 cccccaggcctgtcttctgtccccaacgccaacctgttccctcagcacact--ttttctt 381
Query: 184 ttttttaaatacttatttatttattttatgtatgtgagaacactgtagctgccctcagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttttttaaatacttatttatttattttatgtatgtgagaacactgtagctgccctcagcc 441
Query: 244 acaccagaagagggcatcagatcccattacagatgtttgtgagccaccatgtggttgctg 303
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 442 acaccagaagagggcgtcagatcccattacagatggttgtgagccaccatgtggttgctg 501
Query: 304 ggaattgaactc 315
||||||||||||
Sbjct: 502 ggaattgaactc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_p18.g1 MSMg01no330_p18.g1 CHROMAT_FILE:
MSMg01no330_p18.g1 PHD_FILE: MSMg01no330_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:49 2005
(291 letters)
>mm_chr7_108302041_108302731
Length = 691
Score = 509 bits (263), Expect = e-148
Identities = 284/291 (97%)
Strand = Plus / Minus
Query: 1 accaacaaaaacaaaactttagaaatcatggctttaagtactattaaccccaagtacaaa 60
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 362 accaacaaaaacaaaactttagaaatcatggctttaagtactaaaaaccgtaagtacaaa 303
Query: 61 gtgctagctgtaagccacaaaatgttcaagaaggttattaaaataattatgaaacatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtgctagctgtaagccacaaaatgttcaagaaggttattaaaataattatgaaacatgtt 243
Query: 121 tttcattttattttttgtttacttatttagatgatggcttatttagaccgagggcttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttcattttattttttgtttacttatttagatgatggcttatttagaccgagggcttcac 183
Query: 181 acaacataagcactttaccactgagctacacccttagccgagtatcactttaatcgcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acaacataagcactttaccactgagctacacccttagccgagtatcactttaatcgcttc 123
Query: 241 tttttaaatagtttttattcttttacatatgagttctttgcctacatgttt 291
||||| |||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 122 ttttttaatagtgtttattcttttacatatgagttctttgcctgcatgttt 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
