GCGATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAAGAAGCCGC
GGAATTCTCTATTTGCCTGAAGATATAAGTATTAGAGATGAAGCAACTTG
CAAATGCTCTCACGCTATGGAAGCTGCATAATAAAGAAGCCATGCAGAGA
AATGTGCCTAGGAAGTGTATGCTATGGTTTGTGCATGAACACCTTGTTTC
ATTTGGAGAGCATGTATGTAGAATCTTACATGCTTACCCCCAGAGTAATC
ACAGAGCCACGAACAGAAAAAAAAATCGCAATACCCTGTGCCTCCTTGTG
AGGTCACCCACTGCTAATGAGCACCGTAATGAGCACAGAGATTCTCGCAG
ATTAGGCACTAGCCTGCTAATGCTTAGCCACCAGTGTCCCCTCCAGGGAA
GCTACTTAGACCAGAGCCCAATAAAGACATCTGTGCATGTCTCCACTCAC
ATGCAGCTCCTAGAGAAGCATTCATTTCTATGGATTCCTTTTTATATTTT
CTAAGGATCTTGCACATTAGAAAAGGTCTAAGTGACCGTAAACTGTAATG
TTTCACATTGTTTTATTTAGATGAACCATTATTTACTGATCATTTTTTTC
TTCGATTTTTCCATAGACTTTCTTAAACATGAAATATGTGTTTTTCTCTC
CATTCTTCAAGTGATAGGTAGGCAATGGTAGTGTCTCTGGTTGTACTCAT
AATATGAAACAGATCTCCATGTTG

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGTTCTGTACCCCAT
ATTTTAATTGGGTTATTTGGACTTAATTTAACTTATTGATTTCTTTATAT
ATTTTGGATATTAGCATCTATTGGTGACAATCTTTCCCCAATCTATAGGG
TGCCATTTTGTCCTATTGTTGGTATCCTTTGTCTTACAGAAGCTTTTCAG
TTTCTTGAGATCTCATTTATTAATTTTTTATCTTAGAGTCTGAGCTATTG
GTGTTCTGTTTAGGAAGTCTTCCTGAACAACACATTCAAGTCTATTGTCT
CCTTTCTCTTGTATCAGATTTAGTATATCTGGGTTTATGTTGAGGTCCTT
GATCCACTTTGAATTGCGCCTGCGCAGGTTGATAAATATGGATCTATTTG
CATTCTTCTACATACAAACATTCAGGTAGAACAGCACCATTTGTTGAAGA
TGCTTTCTTTTCTCCTTTTGGCATTTCTGTCAAAAATCAAGTATCCATAG
GTGTGTGGGCTTATTTCTACTTCAGTTAGTTTCTACTGATCAACCAGTAT
ATTTCTGTACCAAATACCTTGCAGATTTTAATCATTATTTTTCTGTGGTA
CAGCTTGAAGTCAGTGAAATCATGGATGCTGACGCTTCCGGACGTTTCCG
ATATTTTACAGGACATTTTTTGCN

Query= MSMg01no331_h18.b1 MSMg01no331_h18.b1 CHROMAT_FILE:
MSMg01no331_h18.b1 PHD_FILE: MSMg01no331_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:23 2005
         (615 letters)



>mm_chr7_76730298_76731313
          Length = 1016

 Score = 1093 bits (565), Expect = 0.0
 Identities = 601/613 (98%), Gaps = 3/613 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctatttgcctga-agatataagtattagagatgaagcaacttgcaaatgctct 63
           |||||||||||| | || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctattggact-acagatataagtattagagatgaagcaacttgcaaatgctct 263

                                                                       
Query: 64  cacgctatggaagctgcataataaagaagccatgcagagaaatgtgcctaggaagtgtat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacgctatggaagctgcataataaagaagccatgcagagaaatgtgcctaggaagtgtat 323

                                                                       
Query: 124 gctatggtttgtgcatgaacaccttgtttcatttggagagcatgtatgtagaatcttaca 183
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctatggtttgtgcatgaacaccgtgtttcatttggagagcatgtatgtagaatcttaca 383

                                                                       
Query: 184 tgcttacccccagagtaatcacagagccacgaacagaaaaaaaaa-tcgcaataccctgt 242
           |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 tgcttacccccagagtaagcacagagccacgaacagaaaaaaaaaatcgcaataccctgt 443

                                                                       
Query: 243 gcctccttgtgaggtcacccactgctaatgagcaccgtaatgagcacagagattctcgca 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcctccttgtgaggtcacccactgctaatgagcaccgtaatgagcacagagattctcgca 503

                                                                       
Query: 303 gattaggcactagcctgctaatgcttagccaccagtgtcccctccagggaagctacttag 362
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 504 gattaggcactagcctgctaatgcttagccaccagggtcccctccagggaagctacttag 563

                                                                       
Query: 363 accagagcccaataaagacatctgtgcatgtctccactcacatgcagctcctagagaagc 422
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 accagagcctaataaagacatctgtgcatgtctccactcacatgcagctcctagagaagc 623

                                                                       
Query: 423 attcatttctatggattcctttttatattttctaaggatcttgcacattagaaaaggtct 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attcatttctatggattcctttttatattttctaaggatcttgcacattagaaaaggtct 683

                                                                       
Query: 483 aagtgaccgtaaactgtaatgtttcacattgttttatttagatgaaccattatttactga 542
           ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 684 aagtgaccgtaaactgtaatgtttcacattgttttgttgagatgaaccattatttactga 743

                                                                       
Query: 543 tcatttttttcttcgatttttccatagactttcttaaacatgaaatatgtgtttttctct 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tcatttttttcttcgatttttccatagactttcttaaacatgaaatatgtgtttttctct 803

                        
Query: 603 ccattcttcaagt 615
            ||||||||||||
Sbjct: 804 tcattcttcaagt 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space:   608630
Effective search space used:   608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)