Query= MSMg01no331_p01.b1 MSMg01no331_p01.b1 CHROMAT_FILE:
MSMg01no331_p01.b1 PHD_FILE: MSMg01no331_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:56 2005
(687 letters)
>mm_chr7_65851594_65852679
Length = 1086
Score = 1180 bits (610), Expect = 0.0
Identities = 652/666 (97%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 22 atgggtcctaatagataacactgaggatttgtgactccaagagttcatccagtcccatgc 81
|||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 222 atgggtactaatagataacactgaggatttgtgactccgagagttcatctagtcccatgc 281
Query: 82 caatgaaggcaaatgttgtgaaggcatagtgaccatctaaagcaggccaggaaagaacca 141
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 caacgaaggcaaatgttgtgaaggcatagtgaccatctaaagcaggccaggaaagaacca 341
Query: 142 gcttaccagtcttcatgatcacatctggttgtaatttaccagaacaacggagtatgttta 201
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 342 gcttaccagtcttcacgatcacatcttgttgtaatttaccagaacaacggagtatgttta 401
Query: 202 tcccccttaaatagagtgttgactcttcattcaattacagagaaattgactaccccctga 261
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tccaccttaaatagagtgttgactcttcattcaattacagagaaattgactaccccctga 461
Query: 262 gatcatttagatagccattttaacctttagtatattacctcctaaaattgttctgcatat 321
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 462 gatcatttagatagccattttaacctttagtacattacctcctaaaattgttctgcatat 521
Query: 322 ataccagcagattcaaaaattctagcataatatgagaaatattgctagcccctcatcaac 381
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ataccagcagattccaacattctagcataatatgagaaatattgctagcccctcatcaac 581
Query: 382 atacaaactccaaaattaattttgaatgtttccaaaacaattacatgtacagaatgcgtc 441
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atacaaactccaaaattgattttgaatgtttccaaaacaattacatgtacagaatgcgtc 641
Query: 442 tttgaaggtgtgactgtgagtagaggccacttaatatctaccatccatatcaatagataa 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tttgaaggtgtgactgtgagtagaggccacttaatatctaccatccatatcaatagataa 701
Query: 502 gaatgggcgattttacaaataaaacttcatggttcatttttctccctcttttataaaata 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gaatgggcgattttacaaataaaacttcatggttcatttttctccctcttttataaaata 761
Query: 562 atgacagaaagtaataaaaaaaaacccaatgaaacaattgcccaaacattaatggagatg 621
|||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 762 atgacagaaagtta-aaaaaaaaacccaatgaaacaattgtccaaacattaatggagatg 820
Query: 622 tcacaattaaatctctgccaagctgttaaacagtactcccatgagtgtcctcaaaattgt 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tcacaattaaatctctgccaagctgttaaacagtactcccatgagtgtcctcaaaattgt 880
Query: 682 atgcag 687
||||||
Sbjct: 881 atgcag 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1086
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1076
Effective search space: 728452
Effective search space used: 728452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_p01.g1 MSMg01no331_p01.g1 CHROMAT_FILE:
MSMg01no331_p01.g1 PHD_FILE: MSMg01no331_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:56 2005
(619 letters)
>mm_chr7_66009233_66010251
Length = 1019
Score = 1135 bits (587), Expect = 0.0
Identities = 608/615 (98%)
Strand = Plus / Minus
Query: 1 attctggctgcaggtttgtgactaggatacagcaacacaactagagctagtcctgcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 attctggctgcaggtttgtgactaggatacagcaacacaactagagctagtcctgcagca 756
Query: 61 tccgttctaagatagttcaccccagcaaacaggctccttgtgcttcaaagaatacagttg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tccgttctaagatcgttcaccccagcaaacaggctccttgtgcttcaaagaatacagttg 696
Query: 121 catagcaagaggttcttcctacatggatcaattaataaacagcatgaacaaagcatccct 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 catagcacgaggttcttcctacatggatcaattaataaacagcatgaacaaagcatccct 636
Query: 181 aaagacacttgtatagaaagcttttaaagcgtaggttgaaagaaagcttttcaaaagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaagacacttgtatagaaagcttttaaagcgtaggttgaaagaaagcttttcaaaagcac 576
Query: 241 tttgttttgtaaagtatagtctgagagtgtgtgttttaaacaaaagtgtcttagtgaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tttgttttgtaaagtatagtctgagagtgtgtgttttaaacaaaagtgtcttagtgaatt 516
Query: 301 atggaaggaattggaaggcaagaacagaggggtggctatttcagtaccgcctagaaaatg 360
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 515 atggaaggaattggaaggcaagaacagaggggtggctatttcagtagtgtctagaaaatg 456
Query: 361 aggcaataaacatggaacccacatctgtcaacatgaccctcactgcaaagatgctgtcca 420
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aggcaataaacatggaaaccacatctgtcaacatgaccctcactgcaaagatgctgtcct 396
Query: 421 gagctatgcacaggagccaagatactagtggattactaagcaagggagcatccagtgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gagctatgcacaggagccaagatactagtggattactaagcaagggagcatccagtgtga 336
Query: 481 ttcaaccatctcctgctcaaaagtcctactgagcaaggatccacaggcctggccaggtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttcaaccatctcctgctcaaaagtcctactgagcaaggatccacaggcctggccaggtct 276
Query: 541 catctaatacctagacttgtaggagtctgctttttcttcttgggctgaggagtccctttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 catctaatacctagacttgtaggagtctgctttttcttcttgggctgaggagtccctttg 216
Query: 601 tcacaggagcaaaac 615
|||||||||||||||
Sbjct: 215 tcacaggagcaaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
