Query= MSMg01no332_l12.b1 MSMg01no332_l12.b1 CHROMAT_FILE:
MSMg01no332_l12.b1 PHD_FILE: MSMg01no332_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:28 2005
(494 letters)
>mm_chr7_29606079_29606972
Length = 894
Score = 940 bits (486), Expect = 0.0
Identities = 492/494 (99%)
Strand = Plus / Plus
Query: 1 attttcaggcaaaagtgagtcagacaccacttccctccccgaccccactgcagctgtggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttcaggcaaaagtgagtcagacaccacttccctccccgaccccactgcagctgtggg 260
Query: 61 tggtggttgctgggaggagactaaccttgtgtggccctgcctaacccctctgctgtctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtggttgctgggaggagactaaccttgtgtggccctgcctaacccctctgctgtctcc 320
Query: 121 tgtttgattcaggcgagcggagctcctctgggctgctggagtgggactcgaagagcgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttgattcaggcgagcggagctcctctgggctgctggagtgggactcgaagagcgatg 380
Query: 181 ccctggagaccttgggcttcctgaaccattaccagatgaaaaacccaagtgagtgtctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctggagaccttgggcttcctgaaccattaccagatgaaaaacccaagtgagtgtctgt 440
Query: 241 gtgtcctgcagaatctccctagtggcttgatggcttgtctggctacatgccagagccatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtcctgcagaatctccctagtggcttgatggcttgtctggctacatgccagagccatc 500
Query: 301 tttctaccctcaagataggaccctagagattgcctttgtcgcagacacaggcagatggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctaccctcaagataggaccctagagattgcctttgtcgcagacacaggcagatggga 560
Query: 361 cttggtcaccaggagagcagtctgatgacatcctcctgggaggccagccaggctgccggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttggtcaccaggagagcagtctgatgacatcctcctgggaggccagccaggctgccggg 620
Query: 421 ttccacccacctgatagcttgggagttgctccagcttaccgtgggtggtgatgagttaga 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 ttccacccacctgatagcttgggagttgctctagcttaccgtgggtggtgatgagttaga 680
Query: 481 tcccggtaattgac 494
||| ||||||||||
Sbjct: 681 tcctggtaattgac 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_l12.g1 MSMg01no332_l12.g1 CHROMAT_FILE:
MSMg01no332_l12.g1 PHD_FILE: MSMg01no332_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:28 2005
(618 letters)
>mm_chr7_29773335_29774352
Length = 1018
Score = 1089 bits (563), Expect = 0.0
Identities = 578/583 (99%), Gaps = 1/583 (0%)
Strand = Plus / Minus
Query: 1 gagctggggacgactcagtaaccctgggctgaaggagcagggtcgggaggggtatggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gagctggggacgactcagtaaccctgggctgaaggagcagggtcgggaggggtatggctt 524
Query: 61 acactgagcatcttggtggcactggggcgtttcttggagttcttagtgagggtgactttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 acactgagcatcttggtggcactggggcgtttcttggagttcttagtgagggtgactttg 464
Query: 121 acaaagttgtggaaggaagatgaccttgggaggaagaagccaggtctgggatgaagggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acaaagttgtggaaggaagatgaccttgggaggaagaagccaggtctgggatgaagggat 404
Query: 181 tggagttcttgccctcaccccccacaccctccctcttcccgccctcaagtcatctccctt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 403 tggagttcttgccctcaccccccacaccctccctcttcctgccctcaagtcatctccctt 344
Query: 241 accatctgctcttttccttcagccgaggaggctggtacccgctcttggtcatgaggaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 accatctgctcttttccttcagccgaggaggctggtacccgctcttggtcatgaggaaga 284
Query: 301 gaaccctagatcagtagggaagaacatgggattcaaatccatgaggacagacctcatagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaaccctagatcagtagggaagaacatgggattcaaatccatgaggacagacctcatagt 224
Query: 361 tccaggagttccccatggaaagaggacaagggaaatggctcagtaggtaagagcacttgc 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttcaggagttccccatggaaagaggacaagggaaatggctcagtaggtaagagcacttgc 164
Query: 421 tatgcaagcctgaggatctgagttcaaatccccagatcccctataaaaaagtcagcatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tatgcaagcctgaggatctgagttcaaatccccagatcccctataaaaaagtcagcatgc 104
Query: 481 ctgtgactctagtttgattttgttatgtagctcaggccagcctcaaattcccggcctctt 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 103 ctgtgactctagtttgattttgttatgtagctcaggccagactcaaattcccggcctctt 44
Query: 541 -gcctcagctacctgagtgctgggacaagccagccatgcttgg 582
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 43 tgcctcagctacctgagtgctggaacaagccagccatgcttgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
