Query= MSMg01no332_m20.b1 MSMg01no332_m20.b1 CHROMAT_FILE:
MSMg01no332_m20.b1 PHD_FILE: MSMg01no332_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:39 2005
(439 letters)
>mm_chr7_71654608_71655446
Length = 839
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Plus
Query: 1 taagtttggccttttagagcagaagggctatcctttgtggggaatccagggcacagggga 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagtttgcccttttagagcagaagggctatcctttgtggggaatccagggcacagggga 260
Query: 61 gggactagtttcctggcattgggattagttagtctgtgttggtcaggacccagatgggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggactagtttcctggcattgggattagttagtctgtgttggtcaggacccagatgggtg 320
Query: 121 catgatatttatgcatcctgactgataggcctggaacggccttgggtggtcctgaggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgatatttatgcatcctgactgataggcctggaacggccttgggtggtcctgaggggt 380
Query: 181 tgggaacaaagcagatggagtgagcaagctatagtggattttctggaactgtgcctcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggaacaaagcagatggagtgagcaagctatagtggattttctggaactgtgcctcaag 440
Query: 241 acctgatagtaggatcatgggtgaatggctggctgttaggggccttatgatggtcacatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctgatagtaggatcatgggtgaatggctggctgttaggggccttatgatggtcacatc 500
Query: 301 aacagtcgaggtgatgcacacagggatatagggcagaataaggctcagttggggacctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacagtcgaggtgatgcacacagggatatagggcagaataaggctcagttggggacctgg 560
Query: 361 gaccatgttaaggtcaccaagaggggttctctgaggatataagagcagttttgccagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaccatgttaaggtcaccaagaggggttctctgaggatataagagcagttttgccagggt 620
Query: 421 ccccttctgtccccagggt 439
|||||||||||||||||||
Sbjct: 621 ccccttctgtccccagggt 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_m20.g1 MSMg01no332_m20.g1 CHROMAT_FILE:
MSMg01no332_m20.g1 PHD_FILE: MSMg01no332_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:39 2005
(657 letters)
>mm_chr7_71846299_71847355
Length = 1057
Score = 1108 bits (573), Expect = 0.0
Identities = 628/657 (95%), Gaps = 17/657 (2%)
Strand = Plus / Minus
Query: 1 ccacattcccactttctgcttccagataatcacagccacctctggtgacatactaaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 929 ccacattcccactttctgcttccagataatcacagccacctctggtgacataccaaccat 870
Query: 61 tctgaaagccaagtagagcagttctgctggctgagccaacaagacccgacaatcaagttt 120
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 869 tctgaaagccaa-----------------gctgagccaacaagacccgacaatcaagttt 827
Query: 121 ggaagctctgggagaggaggcaggcaacaacagcaagcggcacccatgggattcctcttt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ggaagctctgggagaggaggcgggcaacaacagcaagcggcacccatgggattcctcttt 767
Query: 181 caaaacattcctgggactttgtaaaagtaggtgcagaggtcaccctgtcacactgaccag 240
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 766 caaaacagtcctgggactttgtaaaagtaggttcagaggtcaccctgtcacactgaccag 707
Query: 241 agagaaaggtgattaaaaataaaggctgagtgcaaccagtatggactacagaaaccagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 agagaaaggtgattaaaaataaaggctgagtgcaaccagtatggactacagaaaccagct 647
Query: 301 gatgtgcagacacagaaggcatgtgtgaacagaggcatgtgtgggcagagaaagaagcgt 360
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 646 gatgtgcagacactgaaggcatgtgtgaacagaggcatgtgtgggcagagaaagaagcat 587
Query: 361 tgcaggagggttatagtcagaaagagaccatatgtcctccacagagacccagggccttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tgcaggagggttatagtcagaaagagaccatatgtcctccacagagacccagggccttcc 527
Query: 421 cagagtctttcatcctgagtaagactggagtggttctcagcaaacccccaaacccctggc 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cagagtctttcctcctgagtaagactggagtggttctcagcaaacccccaaacccctggc 467
Query: 481 gtcaggcacttgccaaaacactatctgagcgtggatagtttgcatcctctgtgcgcagca 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gttaggcacttgccaaaacactatctgagcgtggatagtttgcatcctctgtgcgcagca 407
Query: 541 aacactaaagcccttcttcccactacaaacagatcagagaaggactgggctgctaatgat 600
|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 406 aacactaaagcccttcttcccactgcaaacagatcagagaaggaccaggctgctaatgat 347
Query: 601 cccactgagctttgctgtcagtcctctgctataaagtgggagctaatccttgcttca 657
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cccattgagctttgctgtcagtcctctgctataaagtgggagctaatccttgcttca 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
