Query= MSMg01no333_b02.b1 MSMg01no333_b02.b1 CHROMAT_FILE:
MSMg01no333_b02.b1 PHD_FILE: MSMg01no333_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:09 2005
(634 letters)
>mm_chr7_143271515_143272548
Length = 1034
Score = 1205 bits (623), Expect = 0.0
Identities = 629/631 (99%)
Strand = Plus / Plus
Query: 4 actgaacaggacccctctgctaatgcattctggaccacttcattacagtgttttgagtgg 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 204 actgaacaggacccctctgctaatgcattctggaccacttcattacagtgttttgaatgg 263
Query: 64 cacctaaataaatttcatttacactcacatgcctgcttgtcaaaactctgttgataattt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacctaaataaatttcatttacactcacatgcctgcttgtcaaaactctgttgataattt 323
Query: 124 tattattgtaatatactttcttccttaattatttagttccagtaaagtagagaatattaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tattattgtaatatactttcttccttaattatttagttccagtaaagtagagaatattaa 383
Query: 184 tttttatggaaattacctgccccagcaaacctaagccacaagcctgctcttatttccata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttttatggaaattacctgccccagcaaacctaagccacaagcctgctcttatttccata 443
Query: 244 tatgtactttgagaggtattttaataaatcaaccccgaaacctgtcatcgtgagttcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgtactttgagaggtattttaataaatcaaccccgaaacctgtcatcgtgagttcttc 503
Query: 304 tgggacattcaatacttctgctcatctcaacttcttacgtgtgagatagaatggggcaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgggacattcaatacttctgctcatctcaacttcttacgtgtgagatagaatggggcaga 563
Query: 364 gtacattctaatgatttgggagtttgccaggaaatacctggaggtaggaccacgcagaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtacattctaatgatttgggagtttgccaggaaatacctggaggtaggaccacgcagaat 623
Query: 424 cagccccttcccgcccacttgccttgatggacccactctgagggacagcatggctgtgca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagccccttcccgcccacttgccttgatggacccactctgagggacagcatggctgtgca 683
Query: 484 aaggacgttagagttctgatagcattaaggaaagtgacctgaaatttgggcccgcctgat 543
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaggactttagagttctgatagcattaaggaaagtgacctgaaatttgggcccgcctgat 743
Query: 544 ggctgatccgtttcagccagtgcttcggtgaattagctctcttgcaccagctcttcacct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggctgatccgtttcagccagtgcttcggtgaattagctctcttgcaccagctcttcacct 803
Query: 604 ctgtccactctgtgtatgtattctatctgat 634
|||||||||||||||||||||||||||||||
Sbjct: 804 ctgtccactctgtgtatgtattctatctgat 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_b02.g1 MSMg01no333_b02.g1 CHROMAT_FILE:
MSMg01no333_b02.g1 PHD_FILE: MSMg01no333_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:09 2005
(486 letters)
>mm_chr7_143339406_143340291
Length = 886
Score = 843 bits (436), Expect = 0.0
Identities = 460/468 (98%), Gaps = 2/468 (0%)
Strand = Plus / Minus
Query: 16 atgtggctttgtaacatgtcagaccctggtcactcccttttagtgccttaaagataggcc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 atgtggctttgtaacatgtcagaccctggtcactcccttttagtgccttaaagataggcc 827
Query: 76 actggtgattaccaattcacaacaagttttttcctcctatgaaaacatcatgtaggaaca 135
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 826 actggtgattaccaattcacaacaagttttttccttctatgaaaacatcatgtaggaaca 767
Query: 136 actggagtagaaaatctgatgcttatagaagagaaaaata-acacacacacacacacaca 194
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 766 actggagtagaaaatctgatgcttatagaagagaaaaatata-acacacacacacacaca 708
Query: 195 cacacacacacacacacacacacactgtgtgttcagtctatcagttccccctgggtggct 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 cacacacacacacacacacacacactgtgtgttcagtctatcagttccccctgggtggct 648
Query: 255 gacttgtgcacagagtccagcatctctcttttcctgaagaattttgttacaccttcaaaa 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gacttgtgcacagagtccagcatctctcttttcctgaagaattttgttacaccttcaaaa 588
Query: 315 tcactcagccgccagccgccggtcagagtgcctcacccgcatgtcattgaggttttgagt 374
||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 587 tcactcagctgccagctgccggtcagagtgcctcacccacatgtcattgaggtttcgagt 528
Query: 375 agatgcccagcaagatgatctgcagcagtaaaggcctgtttctcccagtcacatcctcca 434
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 527 agatgcccagcaagatgatctgcagcagtaaaggcccgtttctcccagtcacatcctcca 468
Query: 435 atagaaagtggatgtatcttcctccaaacccctttcacatggcctttc 482
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atagaaagtggatgtatcttcctccaaacccctttcacatggcctttc 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
