Query= MSMg01no333_c21.b1 MSMg01no333_c21.b1 CHROMAT_FILE:
MSMg01no333_c21.b1 PHD_FILE: MSMg01no333_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:18 2005
(124 letters)
>mm_chr7_50694239_50694762
Length = 524
Score = 240 bits (124), Expect = 2e-68
Identities = 124/124 (100%)
Strand = Plus / Plus
Query: 1 gattataaacattcattagcacaggaatgatactatccaagcagaggtgcctaaagacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattataaacattcattagcacaggaatgatactatccaagcagaggtgcctaaagacag 260
Query: 61 agccatggaacgctatggaagggggtgatttgtgtctagaatgtggaatgtgggggtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccatggaacgctatggaagggggtgatttgtgtctagaatgtggaatgtgggggtggg 320
Query: 121 gtgg 124
||||
Sbjct: 321 gtgg 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no333_c21.g1 MSMg01no333_c21.g1 CHROMAT_FILE:
MSMg01no333_c21.g1 PHD_FILE: MSMg01no333_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:18 2005
(587 letters)
>mm_chr7_50872181_50873167
Length = 987
Score = 1025 bits (530), Expect = 0.0
Identities = 573/594 (96%), Gaps = 14/594 (2%)
Strand = Plus / Minus
Query: 1 ctgatgtgtgctgagaactgaactgtggctgaagg-ccttcccgcagtcagggcattcat 59
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 829 ctgatgtgtgctgagaactgaactgtggctgaaggccctt-ccgcagtcagggcattcat 771
Query: 60 aaggcttctcgccagtgtgtgttcggctatgcactttaaggtgggactttctcctgaacg 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 aaggcttctcaccagtgtgtgttcggctatgcactttaaggtgggactttctcctgaacg 711
Query: 120 acttcccacagtcgcagcatctgtaaggtttctcaccggtgtgaatgcgatagtgcacag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 acttcccacagtcgcagcatctgtaaggtttctcaccggtgtgaatgcgatagtgcacag 651
Query: 180 gcaggtgagatttattattgaataacttcccacaatctctgcactcatagggcttctccc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gcaggtgagatttattattgaataacttcccacaatctctgcactcatagggcttctccc 591
Query: 240 ctgtgtgaaacctactgtgcttcttcagatctgacgcatagacaaacaatttcccgcagt 299
|||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 590 ctgtgtgaaaccgactgtgtttcttcagatctgatgcatagacaaacaatttcccgcagt 531
Query: 300 ggttacatgtgtaaggcctctccccagtgtggatcctccgatgcgtgcccccc------a 353
|||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 530 ggttacatgtgtaaggcctctccccagtgtggattctccgatgcgtg------gtgagga 477
Query: 354 ccgacttttggctaaaggccttcccacagtcagaacacacataaggcctctcacctgtgt 413
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctgacttttggctaaaggccttcccacagtcagaacacacataaggcctctcacctgtgt 417
Query: 414 gtactcgaagatggatctttaggtgggatgcataactgaatgacttcccacagtcagggc 473
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtattcgaagatggatctttaggtgggatgcataactgaatgacttcccacagtcagggc 357
Query: 474 atctgtaaggtttctcctttgtgtgagttccatgccgtgcctgcaggctggatgtactgg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atctgtaaggtttctcctttgtgtgagttccatgccgtgcctgcaggctggatgtactgg 297
Query: 534 gaagtgatttccgacagccaggacatccatgatgtgtctctcctctgtctgttc 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gaagtgatttccgacagccaggacatccatgatgtgtctctcctctgtctgttc 243
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
