Query= MSMg01no333_i01.b1 MSMg01no333_i01.b1 CHROMAT_FILE:
MSMg01no333_i01.b1 PHD_FILE: MSMg01no333_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:42 2005
(644 letters)
>mm_chr7_72454901_72455937
Length = 1037
Score = 1104 bits (571), Expect = 0.0
Identities = 624/645 (96%), Gaps = 9/645 (1%)
Strand = Plus / Plus
Query: 1 tgtagtccttctctgaattttgaggctcccaagtacctctctgaccttgctttccagacc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgtagtccttctctgaattttgaggctcccaagtacctctctgacctcgctttccagacc 260
Query: 61 atctgccttttaggatttgtttgggcagctcccataattttataaataaattcgtttccg 120
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
Sbjct: 261 atctgccttttaggatttgtttgggcagctcccataattttataaatcagttcgtttctg 320
Query: 121 cgggtctggctttgtggagtctgagcccactggtgcctgtgctgggtcacacccaactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgggtctggctttgtggagtctgagcccactggtgcctgtgctgggtcacacccaactct 380
Query: 181 cagccctaacctctgtgggtgaggatcggagcagagatggaccagtcggcagcagaaagc 240
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 381 cagccctaacctctgtgggtgaggatcggagcagagatggaccggtcggcagcagagagc 440
Query: 241 actagtccagcaggcacaagaaaaaagggcaccagcacagaagtagagagaagcaaacag 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 actagtccagcaggcacaagaaaaaagggcaccagcacacaagtagagagaagcaaacag 500
Query: 301 aggggaagactgagagcaagaaagctgtcatttcatctcacccaatcatctgtaaagcca 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 aggggaagactgagagcaagaaagctgtcatttcatctcacccaat-atctgtaaagccg 559
Query: 361 gactaggaaacgctacaaactcccatgctcgaaaaatcaagacagaaacagctctcctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gactaggaaacgctacaaactcccatgctcgaaaaatcaagacagaaacagctctcctca 619
Query: 421 cctttgtgaaa-caaaaaaatacctgagtgctccctatgacccctcacctacctagctgt 479
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 620 cctttgtgaaatcaaaaaa-tacctgagtgctccctatgacccctcacctacctagttgt 678
Query: 480 aagtcttaaagacaaaagcaaaataaggaaaaggttctcactaagtgtatatccctatat 539
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 679 aagtcttaaagacaaaagcaaaataaggaaaaggttatcactaagtgtatatccctatat 738
Query: 540 ggagagactaagattcaccttcacttgagggcttaagctcgctcttttcaccaaaactct 599
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 739 ggagagactaaggttcaccttcacttgagggct------cgctcttttcaccaaaactct 792
Query: 600 cgctttcagcaactttccttacatcaaaactctgtatctgatgtt 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tgctttcagcaactttccttacatcaaaactctgtatctgatgtt 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1037
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1027
Effective search space: 651118
Effective search space used: 651118
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_i01.g1 MSMg01no333_i01.g1 CHROMAT_FILE:
MSMg01no333_i01.g1 PHD_FILE: MSMg01no333_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:42 2005
(519 letters)
>mm_chr7_72516069_72516987
Length = 919
Score = 984 bits (509), Expect = 0.0
Identities = 515/517 (99%)
Strand = Plus / Minus
Query: 3 cgtgtccttacatccttttctggtttagaaaggcaggcagcctgctctgtctcttcaggg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cgtgtccttacatccttttctggtttagaaaggcaggcagcctgctctgtctcttcaggg 660
Query: 63 gccaagaatttcagcaatcttgatagcctaaaatattctattgagatccctgtctagcga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gccaagaatttcagcaatcttgatagcctaaaatattctattgagatccctgtctagcga 600
Query: 123 ggcgggagaagggggctgggattatctcagtgtccagatttgtacctggtttatttaagg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ggcgggagaagggggctgggattatctcagtgtccagatttgtacctggtttatttaagg 540
Query: 183 cagtcggtttgtcctgagccttctagaacgcttctgttgtgctttaaacaaaaacatatc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cagtcggtttgtcctgagccttctagaacgcttctgttgtgctttaaacaaaaacatatc 480
Query: 243 tccaatggggtaacagtgccgagacacatggtgacagttgtgaccattgttacttgcgag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tccaatggggtaacagtgccgagacacatggtgacagttgtgaccattgttacttgcgag 420
Query: 303 gctaaagaaaccacagttgggtattggccaggccgaccttaattgccacactcctgcgtg 362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 419 gctaaagaaaccacagttgggtattggccaggccgaccttaattgtcacactcctgcgtg 360
Query: 363 gggcccatctggggttgctggttgaggagaaagtagacaagtctctgtagggagtcaaaa 422
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 359 gggcccatctggggttgctggttgaggagaaagtagacaagtctgtgtagggagtcaaaa 300
Query: 423 agctttagtacacaggagtttggggttctcgggggtgggggtgaatcgaattctgccgga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 agctttagtacacaggagtttggggttctcgggggtgggggtgaatcgaattctgccgga 240
Query: 483 tctgtgataaaaacaaacaggatggatcgcgcggcag 519
|||||||||||||||||||||||||||||||||||||
Sbjct: 239 tctgtgataaaaacaaacaggatggatcgcgcggcag 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
