Query= MSMg01no333_l24.b1 MSMg01no333_l24.b1 CHROMAT_FILE:
MSMg01no333_l24.b1 PHD_FILE: MSMg01no333_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:00 2005
(636 letters)
>mm_chr7_66362923_66363958
Length = 1036
Score = 683 bits (353), Expect = 0.0
Identities = 359/361 (99%)
Strand = Plus / Minus
Query: 276 gatagaagtaaaaaaatattatactaagtgatataaccatggctcagaaagacaaatgtc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 gatagaagtaaaaaaatattatactaagtgatataaccatggctcagaaagacaaatgtc 977
Query: 336 acattttctttcatatatcaaccatagtctgaaaacttttatatatgtgtgtttaatttg 395
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 976 acattttctttcatatatcaaccatagtctggaaacttttatatatgtgtgtttaatttg 917
Query: 396 gtgatttgtagaactagtgaaatgagaaaggaccatgagagtgggaaggaaaaaggtcta 455
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 916 gtgatttgtagaactagtgaaatgagaaaggaccatgagagtgggaaggaaagaggtcta 857
Query: 456 aaggagtgagaagtagtaggagatgcatgaaagttgaagtgatttatctctactttctgg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 aaggagtgagaagtagtaggagatgcatgaaagttgaagtgatttatctctactttctgg 797
Query: 516 ttgttaacagtttaagtaagtttggcatgagggacagaagagaggaggaatagggtgtgt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttgttaacagtttaagtaagtttggcatgagggacagaagagaggaggaatagggtgtgt 737
Query: 576 tagccaaaataaatatggatgaataactattacagaaacacaatacttttgtaagttaac 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tagccaaaataaatatggatgaataactattacagaaacacaatacttttgtaagttaac 677
Query: 636 t 636
|
Sbjct: 676 t 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_l24.g1 MSMg01no333_l24.g1 CHROMAT_FILE:
MSMg01no333_l24.g1 PHD_FILE: MSMg01no333_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:00 2005
(643 letters)
>mm_chr7_66276148_66277191
Length = 1044
Score = 1189 bits (615), Expect = 0.0
Identities = 636/643 (98%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 1 tctcacaatagtgggctataattggaaattgtgagcaaagtttcccttacaaaagaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcacaatagtgggctataattggaaattgtgagcaaagtttcccttacaaaagaaact 260
Query: 61 aagataatatcaaatcaagaggttcaagaactggtcatttttattaactagaaagggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagataatatcaaatcaagaggttcaagaactggtcatttttattaactagaaagggcca 320
Query: 121 tatgaaaaagaaatctgtcgaaatgatttcaatgatgaatatcctgttgaagtaaactca 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 tatgaaaaagaaatctgtcgaaatgatttcaatgatgaatgtcctgttgaagtaaactca 380
Query: 181 agataaaaagaattaaaattggaaacagtatctatgctatcaaagaattctatactcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agataaaaagaattaaaattggaaacagtatctatgctatcaaagaattctatactcaag 440
Query: 241 tagtctgctgccatgaagtcattaaagaaattattctacagaagaccaaggaaaaagaag 300
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tagtctgctcccatgaagtcattaaagaaattattctacagaagaccaaggagaaagaag 500
Query: 301 tgggtcttttt-atctacaaccaatggtatctacactctcctaaatgtctgtacatgcat 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggtcttttttatctacaaccaatggtatctacactctcctaaatgtctgtacatgcat 560
Query: 360 cacaaaggccaatgctcctttcattggtgctgctatgaattaattataggtagatggaag 419
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacaaaggccagtgctcctttcattggtgctgctatgaattaattataggtagatggaag 620
Query: 420 taatgacctcaaaatatttatctcatttactgtcaatataaatgctcatgaggaagatac 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taatgacttcaaaatatttatctcatttactgtcaatataaatgctcatgaggaagatac 680
Query: 480 atgcaaaataatttttaaagtagagaatgtttaaactatcacaatgtaggtattagaaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgcaaaataatttttaaagtagagaatgtttaaactatcacaatgtaggtattagaaac 740
Query: 540 aatgccctggaccatcttgggcaagaactcagtggggggtcccaaagtccccagaggact 599
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatgccctggaccatcttgcgcaagaactcagtggggggtcccaaagtccccagaggact 800
Query: 600 ctccatactgcaggcatcctagcacacccaggatcttgagatc 642
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctccatactgcaggcatcctagcacacccaggatcttgagatc 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space: 654522
Effective search space used: 654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
