Query= MSMg01no334_a20.b1 MSMg01no334_a20.b1 CHROMAT_FILE:
MSMg01no334_a20.b1 PHD_FILE: MSMg01no334_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:21 2005
(309 letters)
>mm_chr7_58189514_58190223
Length = 710
Score = 534 bits (276), Expect = e-156
Identities = 297/304 (97%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 4 ggaattcacccctg-tttctagagtacattgacataaaatgatcatcaaatttgagtgtt 62
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggaattcacccctgaattctagagtacattgacataaaatgatcatcaaatttgagtgtt 245
Query: 63 gtggatagccgtgggcatatccacgttgtggatatattaacattatagttgatgttaatt 122
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 244 gtggatagccgtggggatatccacattgtggatatattaacattatagttgatgttaatt 185
Query: 123 ccattcttgaacaaggaatgagtcagcactcaggtgatttcctataaacctgcttcccac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ccattcttgaacaaggaatgagtcagcactcaggtgatttcctataaacctgcttcccac 125
Query: 183 cttaatttttaaaataaaggagagctgatgattgggcagataaaagggaaggtggagcag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cttaatttttaaaataaaggagagctgatgattgggcagataaaagggaaggtggagcag 65
Query: 243 aaagtgtggagacagaagaaggtgaaaatggaagatggataggatgcagaggaggaggag 302
|| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 64 aaggtgtggagacagaagaaggagaaaatggaagagggataggatgcagaggaggaggag 5
Query: 303 gagg 306
||||
Sbjct: 4 gagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 710
Length adjustment: 9
Effective length of query: 300
Effective length of database: 701
Effective search space: 210300
Effective search space used: 210300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_a20.g1 MSMg01no334_a20.g1 CHROMAT_FILE:
MSMg01no334_a20.g1 PHD_FILE: MSMg01no334_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:21 2005
(237 letters)
>mm_chr7_57997607_57998243
Length = 637
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 1 cctcaaggccacttccattgtcagctctagatcctatacattcacagtaaactttttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcaaggccacttccattgtcagctctagatcctatacattcacagtaaactttttaaa 260
Query: 61 tttgttcattctaaaagt-aaaaaaaaacaacaaaaacaacaaaaaaaacccacgaattt 119
|||||||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||
Sbjct: 261 tttgttcattctaaaagtaaaaaaaaaaaaacaaaaacaa-aaaaaaaaaccacgaattt 319
Query: 120 agtaatttggtatcgtcgctcactgggaactagtaattttaagacatttaaaattaaact 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtaatttggtatcgttgctcactgggaactagtaattttaagacatttaaaattaaact 379
Query: 180 gggaattcaaaaatatcttaaaatatctttaagacaattatataaagtttgagttttc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggaattcaaaaatatcttaaaatatctttaagacaattatataaagtttgagttttc 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
