Query= MSMg01no335_i11.b1 MSMg01no335_i11.b1 CHROMAT_FILE:
MSMg01no335_i11.b1 PHD_FILE: MSMg01no335_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:19 2005
(239 letters)
>mm_chr7_109851719_109852357
Length = 639
Score = 431 bits (223), Expect = e-125
Identities = 235/239 (98%), Gaps = 2/239 (0%)
Strand = Plus / Minus
Query: 1 ctcagttagacagttaggataccaaggaatgggtaaacagacaatagcacaactttcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctcagttagacagttaggataccaaggaatgggtaaacagacaatagcacaactttcctg 379
Query: 61 ccacccacacattgggctggtgatgacaaaacgtaaaggcataggcaagaaagttttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccacccacacattgggctggtgatgacaaaacgtaaaggcataggcaagaaagttttgag 319
Query: 121 aaaaggtaagtgcattaaaggtaagtcagagcattaggatagctatcccgttccaacagc 180
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 318 aaaaggtaagtgcattaaaggtaagtcagagcattaggatagatatcccgttccaacag- 260
Query: 181 ca-tcgggggagaagacagttaaggagacaacatgcaagcccagcagactgtgatatga 238
|| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 259 cagtcgggggagaagacagttaaggagacaacatgcaagcccagcagcctgtgatatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no335_i11.g1 MSMg01no335_i11.g1 CHROMAT_FILE:
MSMg01no335_i11.g1 PHD_FILE: MSMg01no335_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:19 2005
(243 letters)
>mm_chr7_109647867_109648509
Length = 643
Score = 437 bits (226), Expect = e-127
Identities = 242/252 (96%), Gaps = 9/252 (3%)
Strand = Plus / Plus
Query: 1 atcccagcacagtcaggcaggagcagagagagagagagag--ctggaggggatccccaag 58
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 192 atcccagcacagtcaggcaggagcagagagagagagagagagctggaggggatccccaag 251
Query: 59 tactgttaaatgcacccctcc-------cctgggagctcagctttcagctcagcctatgg 111
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 tactgttaaatgcacccctcctccctcccctgggagctcagctttcagctcagcctatgg 311
Query: 112 cttggagacaagagctgcctgcctgactcatggtcttctaggagcactgagggaccaacc 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cttggagacaagagctgcctgcctgactcatggtcttctaggagcactgagggaccaacc 371
Query: 172 cggtcaccaggatcttcctatggtctgtgctattcagtgtcccctctctggaactagaga 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cggtcaccaggatcttcctatggtctgtgctattcagtgtcccctctctggaactagaga 431
Query: 232 cccaacagagat 243
|| |||||||||
Sbjct: 432 ccaaacagagat 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
