Query= MSMg01no335_p06.b1 MSMg01no335_p06.b1 CHROMAT_FILE:
MSMg01no335_p06.b1 PHD_FILE: MSMg01no335_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:53 2005
(622 letters)
>mm_chr7_146865459_146866478
Length = 1020
Score = 1145 bits (592), Expect = 0.0
Identities = 611/622 (98%), Gaps = 10/622 (1%)
Strand = Plus / Minus
Query: 5 gaattccagcatctttc----atgccagttcaagtccagacctcagcctaccggcttggg 60
||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gaattccagca----tcaaagatgccagttcaagtccagacctcagcctaccggcttggg 765
Query: 61 gacctgcttgtggctatttggaaaacctctaagaggaagttgatgtaaatgagatgttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gacctgcttgtggctatttggaaaacctctaagaggaagttgatgtaaatgagatgttcc 705
Query: 121 ttcaaagtatcgactggaaatgttcttaattaaagtgctgatagctgtctgtgccatcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttcaaagtatcgactggaaatgttcttaattaaagtgctgatagctgtctgtgccatcag 645
Query: 181 caggaatttctcccactcctgctggctttgcactgagcggtggatcctggcgtgtgccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 caggaatttctcccactcctgctggctttgcactgagcggtggatcctggcgtgtgccgt 585
Query: 241 gagcttccctgggaagctccggaaagtttgcaaactacagagtttgccaaagcctgagga 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 584 gagcttccctgggaagctccggaaagtttgcaaactac--agtttgccaaagcctgagga 527
Query: 301 cctagttactggagatttgcaacaaaagagctctgagaatgctaatgtctgttgttttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cctagttactggagatttgcaacaaaagagctctgagaatgctaatgtctgttgttttct 467
Query: 361 gatgtccagagaactgcttgaatgttacctgcaagccggaagaaaggaggatgctaccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gatgtccagagaactgcttgaatgttacctgcaagccggaagaaaggaggatgctaccaa 407
Query: 421 gttctgcttgacagcagcgccattcgtcagaacccaggtgccccacaagtaccggcagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gttctgcttgacagcagcgccattcgtcagaacccaggtgccccacaagtaccggcagat 347
Query: 481 gttctcaaccatggtaaatagacactttgacaagagaggcaataactagctttgttaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gttctcaaccatggtaaatagacactttgacaagagaggcaataactagctttgttaaaa 287
Query: 541 gtcattttctaggaactatgcacaaaacagtaataatcccacttacagaggaaggcagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtcattttctaggaactatgcacaaaacagtaataatcccacttacagaggaaggcagga 227
Query: 601 gcttacacatatgtggacaaag 622
|||||||||| |||||||||||
Sbjct: 226 gcttacacatgtgtggacaaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1020
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1010
Effective search space: 618120
Effective search space used: 618120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_p06.g1 MSMg01no335_p06.g1 CHROMAT_FILE:
MSMg01no335_p06.g1 PHD_FILE: MSMg01no335_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:54 2005
(543 letters)
>mm_chr7_146653229_146654171
Length = 943
Score = 1019 bits (527), Expect = 0.0
Identities = 539/543 (99%)
Strand = Plus / Plus
Query: 1 cttaagcatagggtccaaagacaggacctcgtcccacagcttctgtctgtcactcttcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaagcatagggtccaaagacaggacctcgtcccacagcttctgtctgtcactcttcac 260
Query: 61 aggctgcaggcttctcctaagtccccataggaactgctaggacttttgcccacaagggaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggctgcaggcttctcctaagtccccataggaactgctaggacttttgcccacaagggaa 320
Query: 121 gaacacagcaagagccactggcctcaccaaaaaaccttgggctgtgcttttaggccagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacacagcaagagccactggcctcaccaaaaaaccttgggctgtgcttttaggccagct 380
Query: 181 acattgcctgctcacaggatcagtgaaatttacagtgtcctgtgcagagcagtgcgccct 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acattgcctgctcacagggtcagtgaaatttacagtgtcctgtgcagagcagtgcgccct 440
Query: 241 gaccccccgcccccaagctggccctctgtgctaggcatggacttgagagaggtcgttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaccccccgcccccaagctggccctctgtgctaggcatggacttgagagaggtcgttgga 500
Query: 301 tgaggcctgccacgagctatagccacgagctgtagctagtgaatcccagactagagaacc 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgaggcctgccacgagctgtagccacgagctgtagctagtgaatcccagactagagaacc 560
Query: 361 acagacccaggtatggggtgcctgttgcccagcccatacgatgtggtagagcccccagct 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 acagacccaggtatggggtgcctgttgcccagcccatatgatgtggtagagcccccagct 620
Query: 421 gagccccgggcagtgggtgcttagaacctggcattggtcgcagcccagagagctcttttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagccccgggcagtgggtgcttagaacctggcattggtcgcagcccagagagctcttttg 680
Query: 481 tccctagtgcttatcctggtggccgggctcctgtagtacagcctgcaggatggaattcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tccctagtgcttatcctggtggccgggctcctgtagtacagcctgcaggatggaattcct 740
Query: 541 ttt 543
|||
Sbjct: 741 ttt 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
