ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTGGATCTCGGGCAGTTCTCATGACCTGCCATAACATCTCTCCAACA
TACTGTGATTTTTAATTTGTTCGAGAAGGACAAAAAAAGTTTTTTTTTTG
TAGCAGTAGGCTATCCTTGCCCTTGCTCTAGAGGATTGAATATTATGAGA
AGTCATACTACTCTATTCTCTCTCCTGCATTTTTAAGTCATCCATTAGAT
CTTTCCCCAAACAATTGATGCTAAGAGTTATATAAAATGCCTGTGATGTG
GCTCAATTAGAACAGATTATTGGTAACATTCTTTAAAAAGCTTGGCAGTA
TATAGAGAAGAATTGCCAGTTTTAATATTTTACTGAGAACTAAAATAGCA
AAATTTCTGAGTAAAAGGGCGATCACATCCTTACCTGCTTCTCCTGATAT
GAGAACAGCAAAAATGAGCAAACATTAAGTAGGTATGATGTCCTGAACGT
ATTTTAACTTCCCCAAACAGGAAATGTGAGTAACATCCACATGCAAATAT
GATTTACAGTAGCCCTCCAGGAGTTACACATAAGTGAGTAAAGACTTGAT
ATTAACGAGTACACATGAAGGATATTTTTAGCTGTAAGGTGATTCTGCTA
TTTAGTTAGTAAAAAATATCATTGAAATACTGAAGCATTTTGATATAAGC
ACTTATGAGATTCTTATGCT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTCGCCTTGCCTGCAGCTCCAAGCTCT
GAACAAACAGAGATTAAAAACATGCATGATATGGAAGTTGAGCATTTGAT
GCCTCGGGATGCCTATGAGGGTACTAAAGAAAACTAAGAACCACCATTCC
TCCCTTTATCACACCCTGACTTGCAGCAGCCTCTGCACTGTACTGACACT
GGGAGCCTAAGACAGACATATGTTTCTGACAATGCCAGCTTGGGAGGCAT
CTACCTGGGTCTTGAAGAGAAAGGAACACTGGACAGTTTGATGGTGTCCA
CTATTGACTTTCCAGATATCACTATATTGGTGGCAGATATTCACCTTCCC
CAACTCTTCAAATTCCTCACAGGCGTAGATCAATACCAAGATACAATCAG
CAACTGAATCCAAAGACTCCACAGTCATCTGGAGGGATCTGGCACAAGAA
AACTCCAGAGTCATCAGTGGGTCCTCTGACCAGGTGAGAAAGAAAGACCA
TGACACCTCTGAGTTGATTGATGGAGCTCCTCAGGCCAAAATCCCAAATT
GGGATCTGGTGGAGGGAGAAGGGGCTATGGCCAGTGTTGGGGTCAGTGGC
AGGGCTATTGACAACATGGCTAAGGACTTGGAGGAAAAGCTCCCAAAGTG
TCACCCATCATGCCCTGCAN

Query= MSMg01no336_f03.b1 MSMg01no336_f03.b1 CHROMAT_FILE:
MSMg01no336_f03.b1 PHD_FILE: MSMg01no336_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:21 2005
         (635 letters)



>mm_chr7_48651524_48652558
          Length = 1035

 Score = 1195 bits (618), Expect = 0.0
 Identities = 630/638 (98%), Gaps = 8/638 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctggatctcgggcagttctcatgacctgccataacatctctccaacatactgtg 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattcctggatct-gggcagttctcatgacctgccataacatctctccaacatactgtg 618

                                                                       
Query: 65  atttttaatttgttcgagaaggacaaaaaaag-------ttttttttttgtagcagtagg 117
           ||||||||||||||||||||||||||||||||       |||||||||||||||||||||
Sbjct: 617 atttttaatttgttcgagaaggacaaaaaaagtttttttttttttttttgtagcagtagg 558

                                                                       
Query: 118 ctatccttgcccttgctctagaggattgaatattatgagaagtcatactactctattctc 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctatccttgcccttgctctagaggattgaatattatgagaagtcatactactctattctc 498

                                                                       
Query: 178 tctcctgcatttttaagtcatccattagatctttccccaaacaattgatgctaagagtta 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tctcctgcatttttaagtcatccattagatctttccccaaacaattgatgctaagagtta 438

                                                                       
Query: 238 tataaaatgcctgtgatgtggctcaattagaacagattattggtaacattctttaaaaag 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tataaaatgcctgtgatgtggctcaattagaacagattattggtaacattctttaaaaag 378

                                                                       
Query: 298 cttggcagtatatagagaagaattgccagttttaatattttactgagaactaaaatagca 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cttggcagtatatagagaagaattgccagttttaatattttactgagaactaaaatagca 318

                                                                       
Query: 358 aaatttctgagtaaaagggcgatcacatccttacctgcttctcctgatatgagaacagca 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaatttctgagtaaaagggcgatcacatccttacctgcttctcctgatatgagaacagca 258

                                                                       
Query: 418 aaaatgagcaaacattaagtaggtatgatgtcctgaacgtattttaacttccccaaacag 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaatgagcaaacattaagtaggtatgatgtcctgaacgtattttaacttccccaaacag 198

                                                                       
Query: 478 gaaatgtgagtaacatccacatgcaaatatgatttacagtagccctccaggagttacaca 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaaatgtgagtaacatccacatgcaaatatgatttacagtagccctccaggagttacaca 138

                                                                       
Query: 538 taagtgagtaaagacttgatattaacgagtacacatgaaggatatttttagctgtaaggt 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 taagtgagtaaagacttgatattaacgagtacacatgaaggatatttttagctgtaaggt 78

                                                 
Query: 598 gattctgctatttagttagtaaaaaatatcattgaaat 635
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 77  gattctgctatttagttagtaaaaaatatcattgaaat 40


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)